DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and ptprjb.1

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:XP_017209718.2 Gene:ptprjb.1 / 101883510 ZFINID:ZDB-GENE-090304-1 Length:1104 Species:Danio rerio


Alignment Length:575 Identity:144/575 - (25%)
Similarity:212/575 - (36%) Gaps:155/575 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 ITKTSRPH--DNKVTSKEADSMPRKAWEQQSDEYDIQLDVGFIEQCTRRFESASPSPMPPAYSSG 476
            |:..::|:  .|...||...|.....|...|...|..|....:::.|.|..:.:...:..     
Zfish   649 ISSFTKPNVVSNLTASKVTTSSVTLHWNAPSGPIDYYLVEWSVQRSTDRRTNETFYVITD----- 708

  Fly   477 QHSPILLPTTIADAVGHQQPESG---SDLITIRLQAD-EQGRYGFNVKG---GVDLSLPVQVSKV 534
                 |:|.|..:.  |....:|   |:|:.:.:..| |.|....|..|   |:.|:|...::.:
Zfish   709 -----LMPATKYEI--HVSAVTGGIKSELVFLTVLTDVEAGPTSTNNTGMIVGIVLTLICLIAAI 766

  Fly   535 VPHTPADRCTPRVCEGDEVLMINGRDVHGLRHEQVVAMIRDCRHQASGELLLTVRPQRSAPLLLE 599
            :..               |...:.|.......:..|.||||....|                 |:
Zfish   767 ILF---------------VFFYSRRQSKKQYPDIPVHMIRDQTKNA-----------------LK 799

  Fly   600 EEPLYQYVPESDEIGSHSNLLDGDALFTQSLLLLSDGLASGALLAQYELMYRKNPDLAITEARKP 664
            .|...:|...        |..|.:..|.:                :||.:.......:...|...
Zfish   800 VEDYEEYFKR--------NSADSNCGFAE----------------EYEELKSVGTQQSKAAALAI 840

  Fly   665 ANAPKNRYRDISPYDCTRVSLVNSLTG----DYINANYVNMEIPG-GAVNRYIATQGPLASTTTD 724
            .|..||||.::.|||.:||.|  |:.|    ||||||:|    || .:...:||.||||..|..:
Zfish   841 ENKAKNRYSNVLPYDASRVKL--SMCGSPFDDYINANHV----PGYNSRKEFIAAQGPLPVTLNE 899

  Fly   725 FWRMVQQESSHLLVMLTTVMESGRQKCHQYWPVTGEELQLAEGFSVRCLSEKPDETGSFVFREFV 789
            ||||:.:::.:.:||||...|.||.||.:|||......   ...||...||  .|...:..|:|.
Zfish   900 FWRMIWEKNVYTIVMLTKCNEMGRVKCEKYWPSATSHY---NNISVTTTSE--IELDDWTIRDFR 959

  Fly   790 LKD--KHEQRHIHHMQYLAWPDHCVPSDPNLFLEFTERVRAARNRTLLQEIEESLKQVRLMDADA 852
            :|:  ..|.|::....:.|||||.||....:.::|...||            |.:.|.       
Zfish   960 IKNVKTAETRYVRQFHFTAWPDHGVPETTEILIDFRHLVR------------EHMDQY------- 1005

  Fly   853 DADENGGLMRERKCAASNGATPEDETPVSTSVHQCISAANPPVIVHCSAGIGRTGVLILMDTALA 917
                                                 :.:.|.:||||||:||||..|.:|....
Zfish  1006 -------------------------------------SRHSPTVVHCSAGVGRTGTFIAIDHLSF 1033

  Fly   918 LMEAREPVYPLDIVRTMRDQRACMVQNVSQYRFVCECICAAYMKISRSSAAINDD 972
            .:|....|....||..||..||.|||...||.::.:|   || .:.||....|.|
Zfish  1034 QIERDSMVDIYGIVHDMRMHRALMVQTEDQYVYLHQC---AY-DLIRSRTGTNVD 1084

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604
FERM_N 38..102 CDD:286467
FERM_M 125..232 CDD:278785
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010
FA 333..369 CDD:285894
PDZ_signaling 502..589 CDD:238492 17/90 (19%)
Y_phosphatase 666..955 CDD:278528 93/295 (32%)
PTPc 668..955 CDD:238006 92/293 (31%)
ptprjb.1XP_017209718.2 NupH_GANP 450..>493 CDD:318883
FN3 568..653 CDD:238020 1/3 (33%)
FN3 655..729 CDD:238020 16/85 (19%)
PTPc 817..1071 CDD:214550 98/339 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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