DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and mpdz

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:XP_002940172.2 Gene:mpdz / 100488270 XenbaseID:XB-GENE-994032 Length:2164 Species:Xenopus tropicalis


Alignment Length:812 Identity:160/812 - (19%)
Similarity:273/812 - (33%) Gaps:250/812 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 IDLHRATDSNGKELQLGVSAVG-------LLVFQHSLRVNTFSWSKMVKVSFK--RKDFFIQLRR 284
            ||.|||..: .:.||:.|...|       |.:.:..|:...|:....::.|.:  |:...:....
 Frog     5 IDTHRALQA-VERLQVKVRERGDIANEEKLCLLKSVLQSPLFNQILSLQTSLQHLREQVNVTPAL 68

  Fly   285 EPSENYDTLLGFGMSSHKHAKALWKSCVEHHSFFRLK-------------RPHRLSRFLNISLGS 336
            .....:..:..:|.|:.        |.:::.|:...:             ||  :|..:|..|||
 Frog    69 STVSEFAQVSSYGSSTF--------SALQNESYSMAQQNGSPINSSETTTRP--MSPQINGKLGS 123

  Fly   337 KFYYSGRTELQAVQESKQRGR-IHKVFVRSPSKRLLGAAGGVGTSGSSGGTPMQQHSGSESANSH 400
            :       .|:.:.:...:|| |..:.:..|....||.:.....|.:.|...:......|.:.:|
 Frog   124 E-------NLEQIIKQMAQGRHIETMDLLKPQSGSLGFSVVGLKSENRGELGIFVQEIQEDSVAH 181

  Fly   401 NNGKPAGAGTILTITKTSRPHDNKVTSKEADSMPRKAWEQQSDEYDIQLDV--GFIEQCTRRFES 463
            .:|:...|..||:|  ..:|.|..:|..:|..:.:||.||      :||.:  |.:.|...  .|
 Frog   182 RDGRLKEADQILSI--NGQPLDQTITHHQAIGILQKAKEQ------VQLVIARGPLPQLIS--PS 236

  Fly   464 ASPSPMPPAYSSGQHSPILLPTTIADAVGHQQPESGSDLITIRLQADEQGRYGFNVKGGVDLSLP 528
            .|.||...:..|...||:           |.|     .:.|:.|..|..| .||.:.||  .|..
 Frog   237 ISRSPSEASTVSALSSPM-----------HWQ-----HVETVELVNDGSG-LGFGIVGG--KSTG 282

  Fly   529 VQVSKVVPHTPADRCTPRVCEGDEVLMINGRDVHGLRHEQVVAMIRDCRHQASGELLLTVRPQRS 593
            |.|..::|...||: ..|:|.||.:|.|...|:.|:..|||..::|.|..:.  :|::...|..:
 Frog   283 VIVKTILPGGVADQ-NGRLCSGDHILKIGDTDLAGMSSEQVAQVLRQCGKRV--KLVIARGPVEN 344

  Fly   594 A--------------PLLLEEEPLYQYVPESDEIGSHSNLLDGDALFTQSLLLLSDGLASGALLA 644
            :              |.|||.:.....:.::          ||||.                   
 Frog   345 SSTGVSTGVQITPALPSLLETQVCEGEIKDA----------DGDAF------------------- 380

  Fly   645 QYELMYRKNPDLAITEARKPANAPKNRYRDISPYDCTRVSLVNSLTGDYINANYVNMEIPGGAVN 709
                      |:.:|:                                  ||..:.:.|.|    
 Frog   381 ----------DVKLTK----------------------------------NAQGLGITIAG---- 397

  Fly   710 RYIATQGPLASTTTDFWRMVQQESSHLLVMLTT----VMESGR-QKCHQYWPVTGEELQLAEGFS 769
             |:..:|              .|.|.:.|...|    |.:.|| |...|...|.|..|:   ||:
 Frog   398 -YVGDKG--------------SEPSGIFVKSITKGSAVEQDGRIQVGDQIIVVDGTNLR---GFT 444

  Fly   770 VRCLSEKPDETGSFVFREFVLKDKHEQRHIHHMQYLAWP-------------DHCVPSDPNLFLE 821
            .:...|....||..|....|.:...::..|..::....|             :.|||..|..|..
 Frog   445 NQQAVEVLRHTGQSVHLTLVRRGLKQEACIPQVEEPRKPTESGQPLQNADSSEACVPIIPTSFSS 509

  Fly   822 FTERVRAARNRTLLQEIEESLKQVRLMDADADADENG---------GLMRERKCAASNGATPEDE 877
            ..:. ::..|.:.||..:|:         ..|.||..         |:..|...|..|..:....
 Frog   510 DAQS-QSPANWSSLQAEKET---------QVDTDEEDIKSKWQRIMGVGYEIVVAKVNKFSESSG 564

  Fly   878 TPVSTSV---HQCISAANPPVIVHCSAGIGRTGVL-----ILMDTALALMEAREPVYPLDIVRTM 934
            ..:|...   |..:.:..|      ...:||:|.|     :|....::|:....    :|:|..:
 Frog   565 LGISLEASGGHHFLRSILP------EGPVGRSGSLYSGDELLEVNGISLLGQNH----IDVVNIL 619

  Fly   935 RDQRACMVQNVSQYRFVCECICAAYMKISRSS 966
            ::...|:.           .:|...:|...||
 Frog   620 KELPICVT-----------VVCCRQVKPPNSS 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604 2/2 (100%)
FERM_N 38..102 CDD:286467
FERM_M 125..232 CDD:278785 2/2 (100%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 18/99 (18%)
FA 333..369 CDD:285894 8/36 (22%)
PDZ_signaling 502..589 CDD:238492 28/86 (33%)
Y_phosphatase 666..955 CDD:278528 55/323 (17%)
PTPc 668..955 CDD:238006 55/321 (17%)
mpdzXP_002940172.2 L27_2 6..63 CDD:312549 13/57 (23%)
PDZ_signaling 139..225 CDD:238492 23/93 (25%)
PDZ_signaling 259..338 CDD:238492 28/84 (33%)
PDZ 380..467 CDD:214570 27/171 (16%)
PDZ_signaling 560..629 CDD:238492 12/89 (13%)
PDZ 726..814 CDD:214570
PDZ 1038..1108 CDD:214570
PDZ_signaling 1195..1286 CDD:238492
PDZ 1440..1526 CDD:214570
PDZ 1574..1657 CDD:214570
MPDZ_u10 1662..1722 CDD:374710
PDZ 1723..1807 CDD:214570
PDZ_signaling 1819..1899 CDD:238492
PDZ_signaling 1954..2039 CDD:238492
PDZ_signaling 2080..2163 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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