DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ptpmeg and ptpn14

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:XP_031758936.1 Gene:ptpn14 / 100379917 XenbaseID:XB-GENE-985641 Length:1176 Species:Xenopus tropicalis


Alignment Length:1272 Identity:271/1272 - (21%)
Similarity:452/1272 - (35%) Gaps:428/1272 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GPELARDKK-TPQRQQC--VTVLFLD--DITHTFRIEKRAKGSELLDQVFQYLELSERDYFGLLF 79
            |.:|.|.|: ....:.|  |.:..||  ::.:|..::  :.|.|.|:.|.|.|||.|...|||.:
 Frog     4 GLKLRRTKRYNVLSKNCFVVRIQLLDNSEVEYTRTVD--STGLECLEAVAQRLELCEIHCFGLQY 66

  Fly    80 PQKPGDVVRWVDAQKQFKKQCSSVSLDNDAVP-LLEFRVKFFVSDPSRLQEEFTRYQFYLQIKRN 143
            ..| .:.:|||:.:|..|||     ||..|.. |:.|.:.::|.:.|.|::..||.|:|||:|::
 Frog    67 VGK-NNQMRWVELEKSLKKQ-----LDKFANKFLVFFGIMYYVPNVSYLKQPTTRTQYYLQLKKD 125

  Fly   144 ILLGKLPCSSNTQCLLASYTVQSELGDFNAL--EHQPGYLSGMQLLCDQTTEAE-------RKVG 199
            :..|:|..|:.....||...:::|:.||:.|  .|   :|....|.....|:.|       .||.
 Frog   126 VYEGRLCGSAEQYFRLAGLALRAEIKDFDLLGTYH---FLKDYTLFPQAWTKDEAMLEGLCHKVA 187

  Fly   200 ELHKLHRGQLPADAEYNYLEHAKRLELYGIDLHRATDSNGKELQLGVSAVGLLVFQHSLRVN-TF 263
            ..:|...|...|:||..||:.|:.::.||.:.....|::|.::.|.:|.:|:.:..:..:.. |:
 Frog   188 LEYKALSGIPSAEAEILYLKEAEHMDGYGQESFHMKDNHGNDINLCISFMGIFIRNNCRQATATY 252

  Fly   264 SWSKMVKVSFKRKDFFIQLRREPSENYDTLLGFGMSSHKHAKALWKSCVEHHSFFRLKR------ 322
            .||.:..::..:....::|.|:     :.::.|.....:::|.:.:.....|.|::..:      
 Frog   253 RWSDIGNITHNKSAIVLELNRK-----EEVVVFSTDDIENSKYITRLFAARHKFYKDNKICTEQS 312

  Fly   323 --PHRLSRFLNISLGS-------------------------------KFYYSGRTELQA------ 348
              |..:.|..|.:..|                               .|.|..:|.|..      
 Frog   313 SSPPAVRRQPNWNRSSMSRQQTILPPRHIHGGETYISEDNIFHMNEDAFNYRSQTSLDRYLDPNF 377

  Fly   349 -------------------------VQESKQRGRI-----------------HKVFVRSPSKRLL 371
                                     :|.|.....:                 |...: :||.|..
 Frog   378 INGTLVNGSDSSAHSINSLNRSQNFIQASPMSSSLSIQSNDIMRADYIPSYRHSAII-APSYRPT 441

  Fly   372 GAAGGVGTSGSSGGTPMQQHS--------GSESANSHNNG------------------KPAGAGT 410
            .....|....:.|..||...|        |:..|..|...                  .|..|.|
 Frog   442 PDYETVMRQMNRGIIPMDCQSQSLRNLNIGNTHAYRHRENLVYSQPEIQERHAYVPPYVPQTAYT 506

  Fly   411 ILTITKTSRPHDNKVTSKEADSMPRKAWEQQSDEYDIQLDVGFIEQCTRRFESASPSPMPPAYSS 475
            .:.|....:.:..||||.:|.::.......:......|. |.......:.|.|..|.|.||...:
 Frog   507 NVLINPIEQINPTKVTSNQAKAISHTVSTPELANVPPQA-VQSAALMLKNFLSRPPPPYPPTRPA 570

  Fly   476 GQHSPILLPTTIADAVGHQQPE-SGS--DLITIRLQADEQGRYGFNVKGGVDLSLPV------QV 531
                     ::..|...|:|.. |||  ||:|.::|.        :||...:.|.||      :|
 Frog   571 ---------SSTPDLASHRQKRVSGSSPDLVTRKVQQ--------SVKTFQEDSAPVVHQSLQEV 618

  Fly   532 SK----VVPHTPADRC-----TPRVCEGDEVLMINGRDVHGLR----HEQV-------------- 569
            |:    |.||...::|     ...:..|.|.:.:...:.|..|    .|||              
 Frog   619 SEPLMMVKPHPSVNKCHSFEVITNMVRGMEAMALKTMNAHLPRRNTLREQVPTEESMQKAHEVQQ 683

  Fly   570 ------------------------------------------------VAMIR------------ 574
                                                            .|:.|            
 Frog   684 LPMYHHKKNISDATMLILSSESEEEEEPHKSVSPTSPLQGMAYSAQLQAALARIPKKPPPEYPGP 748

  Fly   575 -------DCRHQASGELLLTVR----------------------------PQRSAPLL------L 598
                   ..||::|....:..|                            |..|.|.|      :
 Frog   749 RKSISNGALRHESSNISSVIARAKAMSQRPCQAACISKTEPAAMNGSSLGPSISEPDLTCVKERI 813

  Fly   599 EEEPLYQYVPESDEIGSHSNLLDGD------------ALFTQS---LLLLSDGLA---------- 638
            ::||:.:. |.|:.......:::.:            ||..|.   ::...:||:          
 Frog   814 KKEPVKER-PVSEMFSIEDVIVEREIMMRNLEKQEMAALEAQKRPLMMAALNGLSVSRIARPEDR 877

  Fly   639 ---------------------SGALLAQYELMYRKNPDLAITEARKPANAPKNRYRDISPYDCTR 682
                                 .|.:..:||.:.::.|:...|.|..|.|..:||..:..||:..|
 Frog   878 QDDTALIQMDERCKTLRWRLEEGMVFTEYEQIPKRKPEGVFTTAVLPENLERNRICEDIPYEENR 942

  Fly   683 VSLV---NSLTGDYINANYVNMEIPGGAVNRYIATQGPLASTTTDFWRMVQQESSHLLVMLTTVM 744
            |.||   .:.|| ||||:::.:.:.|...: ||||||||..|..|||:||.::..:::.|:....
 Frog   943 VELVPTKENPTG-YINASHIKVTVSGKDWH-YIATQGPLPHTFHDFWQMVWEQGVNVIAMVNADE 1005

  Fly   745 ESGRQKCHQYWPVTGE--------ELQLAEGFSVRCLSEKPDETGSFVFREFVLKDKH----EQR 797
            |.||.|.|:|||..|.        :.::...|          .|.|..:....||.||    ::|
 Frog  1006 EEGRAKSHRYWPKLGTKHNSETYGKFKVTTNF----------RTDSGCYATTGLKVKHLLTGQER 1060

  Fly   798 HIHHMQYLAWPDHCVPSDPNLFLEFTERVRAARNRTLLQEIEESLKQVRLMDADADADENGGLMR 862
            .:.|:|:..||||..|.:...||.:.|.:|:.|..                              
 Frog  1061 TVWHLQFTDWPDHGCPDEMQGFLSYLEEIRSVRRH------------------------------ 1095

  Fly   863 ERKCAASNGATPEDETPVSTSVHQCISAANPPVIVHCSAGIGRTGVLILMDTALALMEAREPVYP 927
                     |.|.             |..||||:||||||:|||||::|.:..:..:|..|.:..
 Frog  1096 ---------ANPS-------------SLCNPPVVVHCSAGVGRTGVVVLTELMIRCLENNENIEI 1138

  Fly   928 LDIVRTMRDQRACMVQNVSQYRFVCECICAAYMKISR 964
            ..::|.:|:||..|:|.::||.||.: :...::|.||
 Frog  1139 PAMLRHLREQRMFMIQTIAQYTFVYQ-VLIYFLKSSR 1174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604 66/210 (31%)
FERM_N 38..102 CDD:286467 23/65 (35%)
FERM_M 125..232 CDD:278785 35/115 (30%)
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010 16/94 (17%)
FA 333..369 CDD:285894 10/114 (9%)
PDZ_signaling 502..589 CDD:238492 26/186 (14%)
Y_phosphatase 666..955 CDD:278528 91/303 (30%)
PTPc 668..955 CDD:238006 90/301 (30%)
ptpn14XP_031758936.1 FERM_F1_PTPN14_like 18..102 CDD:340619 30/91 (33%)
B41 22..220 CDD:214604 65/208 (31%)
FERM_C_PTPN14_PTPN21 215..305 CDD:270009 16/94 (17%)
PTPc-N14 889..1171 CDD:350447 98/346 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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