DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ptpmeg and sntg1

DIOPT Version :9

Sequence 1:NP_001163309.2 Gene:Ptpmeg / 38059 FlyBaseID:FBgn0261985 Length:974 Species:Drosophila melanogaster
Sequence 2:XP_002666738.3 Gene:sntg1 / 100330925 ZFINID:ZDB-GENE-140106-77 Length:525 Species:Danio rerio


Alignment Length:545 Identity:110/545 - (20%)
Similarity:192/545 - (35%) Gaps:168/545 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   498 SGSDLITIRLQADEQGRYGFNVKGGVDLSLPVQVSKVVPHTPADRCTPRVCEGDEVLMINGRDVH 562
            |....:|||.|.  .|.:|.::|||.:..:||.:||:.....|: .:..:..||.:|.|||.:|.
Zfish    53 SSERTVTIRRQT--IGGFGLSIKGGAEHKIPVVISKISKEQKAE-LSGLLFIGDGILQINGINVR 114

  Fly   563 GLRHEQVVAMIRDCRHQASGELLLTVRPQRSAPLLLEEEPLYQ---YVPESDEIGSHSNLLDGDA 624
            ..|||:||.::|:    |..|:.|||...:..|..| :.||.:   .:|.....|:.|.|.|   
Zfish   115 SYRHEEVVQVLRN----AGEEVTLTVSFLKRTPAFL-KLPLCEDCSCIPSDQSSGTSSPLCD--- 171

  Fly   625 LFTQSLLLLSDGLASGALLAQYELMYRKNPDLAITEARKPANAPKNRYRDISP--------YDCT 681
                      .||         .|.|..|.    |:....::.|      :||        .|..
Zfish   172 ----------SGL---------HLNYHPNN----TDTLSCSSWP------MSPGLRWEKRWVDLR 207

  Fly   682 RVSLVNSLTGDYINANYVNMEIPGGAVNR-----YIATQG--------PLASTTTDFWRMVQQES 733
            .:.|:::....|         :||..:.|     .||..|        |.....||:.:.:... 
Zfish   208 LIPLLHARLSQY---------VPGTDICRQNAFQVIAVDGVCSGVIQCPGTDECTDWLQAISAN- 262

  Fly   734 SHLLVMLTTVMESGRQKCHQYWPVTGEELQLAEGFSVRCLSEKPDETGSFVFREFVLKDKHEQRH 798
                  ::.:.:...:|.::.:||..:                      .::..:|  |:.||..
Zfish   263 ------ISALTKHNVKKINRNFPVNQQ----------------------IIYMGWV--DEKEQDS 297

  Fly   799 IHHMQYLAWPDHCVPSDPNLFLEFT-------ERVRAARNRTLLQEIEESLKQVRLMD------- 849
            :....|.  |........:|| :|:       :..||.::.|:.:.:.:.||...|:|       
Zfish   298 VQDRMYT--PKFLALRGSSLF-KFSAPPVTTWDWTRAEKSFTVYEIMFKILKDSELLDKRKHCFS 359

  Fly   850 ADADADENGGLMRERKC------AASNGATPEDETPVSTSVHQCI-------------------S 889
            ...|:.|:.....|.:|      .|...||..:...:....:.||                   .
Zfish   360 VQTDSGEDIFFSVELECELLLWEKAFQMATFFEVERIQCKTYACIVDSHLMGLTIDFSMGFVCFD 424

  Fly   890 AANPPVI-------VHCSAGIGRTGVLIL---MDTALALMEAREPVYPLDIVRTMRDQRACMVQN 944
            ||:..|:       :..|:..|::.:..|   .||  .|:||:|          :.......|.:
Zfish   425 AASKAVLWRYKFSQLKGSSDDGKSKIKFLFQNQDT--KLIEAKE----------LEFSNLFAVLH 477

  Fly   945 VSQYRFVCECICAAYMKISRSSAAI 969
            .....|..:..|...|.:|..:||:
Zfish   478 CIHAFFAAKVACLDPMFVSSRNAAM 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PtpmegNP_001163309.2 B41 35..232 CDD:214604
FERM_N 38..102 CDD:286467
FERM_M 125..232 CDD:278785
FERM_C_PTPN4_PTPN3_like 226..320 CDD:270010
FA 333..369 CDD:285894
PDZ_signaling 502..589 CDD:238492 31/86 (36%)
Y_phosphatase 666..955 CDD:278528 57/358 (16%)
PTPc 668..955 CDD:238006 57/356 (16%)
sntg1XP_002666738.3 PDZ_signaling 55..136 CDD:238492 30/87 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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