DRSC/TRiP Functional Genomics Resources

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Protein Alignment mth and GCR1

DIOPT Version :10

Sequence 1:NP_728521.1 Gene:mth / 38058 FlyBaseID:FBgn0023000 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_175261.1 Gene:GCR1 / 841247 AraportID:AT1G48270 Length:326 Species:Arabidopsis thaliana


Alignment Length:274 Identity:65/274 - (23%)
Similarity:99/274 - (36%) Gaps:81/274 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 GKCFICYMVCLFMGY------LFLLLDLWQISISF------------CKPAGFLGYFFVMAAFFW 293
            |..||....|||...      |...|.|..:..||            |...|:..:||.:|:|.|
plant    33 GSAFIVLCYCLFKELRKFSFKLVFYLALSDMLCSFFLIVGDPSKGFICYAQGYTTHFFCVASFLW 97

  Fly   294 LSVISLHLWNTFRGSSHKANRFLFEHRFLAYNTYAWGMAVVLTGITVLADNIVENQDWNPRVGHE 358
            .:.|:..|..|.  ..||.:   .|.....::.|.||.::|:|.|....:|......|       
plant    98 TTTIAFTLHRTV--VKHKTD---VEDLEAMFHLYVWGTSLVVTVIRSFGNNHSHLGPW------- 150

  Fly   359 GHCW--------------IYTQAWSAMLY---FYGPMVFLIAFNITMFILTAKRI-LGVKKDIQN 405
              ||              .|...|.|:||   .|        |.:...:..|:|: :|:...:..
plant   151 --CWTQTGLKGKAVHFLTFYAPLWGAILYNGFTY--------FQVIRMLRNARRMAVGMSDRVDQ 205

  Fly   406 FAHRQERKQKLNSDKQTYTFFLRLFIIMGLSWSLEIGSYFSQSNQTWANVFLVADYLNWSQGIII 470
            |.:|.|.| .||    .:.::  ..|::| ||:      |...|:       :.|::  ..|..|
plant   206 FDNRAELK-VLN----RWGYY--PLILIG-SWA------FGTINR-------IHDFI--EPGHKI 247

  Fly   471 FILFVLKRSTWRLL 484
            |.|.||...|..|:
plant   248 FWLSVLDVGTAALM 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthNP_728521.1 Methuselah_N 29..209 CDD:429053
7tmB3_Methuselah-like 219..488 CDD:410632 65/274 (24%)
TM helix 2 247..269 CDD:410632 8/27 (30%)
TM helix 3 277..304 CDD:410632 8/26 (31%)
TM helix 4 321..341 CDD:410632 6/19 (32%)
TM helix 5 367..396 CDD:410632 7/31 (23%)
TM helix 6 418..445 CDD:410632 4/26 (15%)
TM helix 7 453..478 CDD:410632 7/24 (29%)
GCR1NP_175261.1 7tm_GPCRs 26..272 CDD:475119 65/274 (24%)
TM helix 2 48..69 CDD:410628 5/20 (25%)
TM helix 3 81..103 CDD:410628 7/21 (33%)
TM helix 4 122..138 CDD:410628 5/15 (33%)
TM helix 6 205..237 CDD:410628 12/52 (23%)
TM helix 7 248..272 CDD:410628 6/14 (43%)
Blue background indicates that the domain is not in the aligned region.

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