DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mth and adgrg3

DIOPT Version :10

Sequence 1:NP_728521.1 Gene:mth / 38058 FlyBaseID:FBgn0023000 Length:522 Species:Drosophila melanogaster
Sequence 2:XP_073763566.1 Gene:adgrg3 / 799479 ZFINID:ZDB-GENE-140106-110 Length:518 Species:Danio rerio


Alignment Length:568 Identity:117/568 - (20%)
Similarity:192/568 - (33%) Gaps:171/568 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 DILECDYFDTVDISAAQKLQNGSYLFEGLLVPAILTGEYDFRILPDDSKQKVARHIRGCV----- 84
            |:|:|         ..||::|.|     .:.|.|.|..|..:.:  ||..|.....:|.|     
Zfish    39 DVLQC---------MEQKMKNCS-----AIRPRIPTPNYFVKSI--DSLVKSLDTEKGYVINISD 87

  Fly    85 -----------------CKLKPCVRFCCPHDHIMDNGVCYDNMSDE-----ELAELDP------F 121
                             .|||.         :::|..:.....|.|     :|...||      .
Zfish    88 EALQRSRDGLENSSSEDVKLKV---------YLLDESLFKITSSSEIKEGNDLNGSDPVLLKQSV 143

  Fly   122 LNVTLDDGSV-------------SRRHFKNELIVQWDLPMPCDGMFYLDNREEQDKYTLFENGTF 173
            |.|.|....|             :....:|.:.|.|.|.....|.:..|..:     |..:||.|
Zfish   144 LGVWLGTTEVNNLSQPVQLKFRNTHNQTENGICVYWHLEKNGGGNWSTDGCK-----TNIDNGDF 203

  Fly   174 FRHFDRVTLRKREYC-LQHLTFADGNATSIRIAPHNCLIVPSITGQTVVMISSLICMV------- 230
                         .| ..||:|            ...||.|.|..::.::..:.|..|       
Zfish   204 -------------VCSCNHLSF------------FAVLISPQIPEKSHIVHLNYISYVGSALSIA 243

  Fly   231 ---LTIAVYLFVKKLQNLHGKCF-ICYMVCLFMGYLFLLLDLW----QISISFCKPAGFLGYFFV 287
               |.|.::|..:|.|..|.... :....|||:.::..|..:|    ..|.|.|:..|.|.::.:
Zfish   244 FTSLVIVLFLCQRKKQCEHSLVIHVQLSSCLFLLHISFLCSVWFSGHSDSDSVCQTIGLLLHWCL 308

  Fly   288 MAAFFWLSVISLHLW-------NTFRGSSHKANRFLFEHRFLAYNTYAWGMAVV---LTGITVLA 342
            :|.|.|.::...||:       |.:      ..|::     |..:...||:..|   :.|:|.:.
Zfish   309 LATFTWTAIEGFHLYLLLVRVFNIY------IKRYM-----LKLSLMGWGVPTVTAMICGMTKVY 362

  Fly   343 DNIVENQDWNPRVGHEGHCWIYTQAWSAMLYF--YGPMVFLIAFNITMFILTAKRILGVKKDIQN 405
            .......|...... ...||:.|   :.::|.  .|.:..::.||:.|..:...::         
Zfish   363 GKYTLYTDQENSTA-TSLCWVTT---NTVIYITVNGYLGLVMLFNMAMLAVVVVKM--------- 414

  Fly   406 FAHRQERKQKLNSDKQTYTF-----FLRLFIIMGLSWSLEIGSYFSQSNQTWANVFLVADYLNWS 465
               ||.|:|.:..|.|...:     .|.|..::|:.|.|.    ||...........|...||..
Zfish   415 ---RQLRQQNVQIDHQKRAWKDCVSLLGLCFVLGVPWGLA----FSTHGPLSLPALYVFTILNSF 472

  Fly   466 QGIIIFILFVLKRSTWRLLQERNHPKSTRSV--ISNRSMASRITVGTT 511
            ||:.|| |::|..:.....:::...|.|..|  :||...   :|..||
Zfish   473 QGVFIF-LWILTLTCKARKEKQTSSKGTIQVSYLSNEEY---VTSKTT 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthNP_728521.1 Methuselah_N 29..209 CDD:429053 41/226 (18%)
7tmB3_Methuselah-like 219..488 CDD:410632 62/300 (21%)
TM helix 2 247..269 CDD:410632 4/22 (18%)
TM helix 3 277..304 CDD:410632 7/33 (21%)
TM helix 4 321..341 CDD:410632 6/22 (27%)
TM helix 5 367..396 CDD:410632 5/30 (17%)
TM helix 6 418..445 CDD:410632 7/31 (23%)
TM helix 7 453..478 CDD:410632 9/24 (38%)
adgrg3XP_073763566.1 None

Return to query results.
Submit another query.