DRSC/TRiP Functional Genomics Resources

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Protein Alignment mth and adgre5b.3

DIOPT Version :10

Sequence 1:NP_728521.1 Gene:mth / 38058 FlyBaseID:FBgn0023000 Length:522 Species:Drosophila melanogaster
Sequence 2:XP_005160275.1 Gene:adgre5b.3 / 792970 ZFINID:ZDB-GENE-121214-275 Length:756 Species:Danio rerio


Alignment Length:311 Identity:76/311 - (24%)
Similarity:137/311 - (44%) Gaps:46/311 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 VVMISSLICMVLTIAVYLFVKKLQNLHGKCFICYMVCLFMGYLFLLLDLW----QISISFCKPAG 280
            |.::.||||::|.|..:.|.:.:|.......:...||||:..|..|..:.    |::.:..  ||
Zfish   472 VGLVLSLICLILCILTFRFCRSIQGTRNSIHLHLSVCLFIADLVFLCGISSTHNQVACAIV--AG 534

  Fly   281 FLGYFFVMAAFFWLSVISLHLWNTFRGSSHKANRFLFEHRFLAYNTYAWGMAVVLTGITVLADNI 345
            .| :||.::||.|:.:..:.|:.......|...:.|:.:      ...:|:.:|:..|:.:|   
Zfish   535 LL-HFFFLSAFCWMLLEGVQLYRMVVLVFHTTLKHLYMY------AVGYGVPLVIVSISAIA--- 589

  Fly   346 VENQDWNPR-VGHEGHCWIYTQAWSAMLYFYGPMVFLIAFNITMFILTAKRILGVKKDIQNFAHR 409
                  .|: .|.:.|||:..:.: .:|.|:.|:..::..|||:||:|..: |.:|     |:..
Zfish   590 ------VPKGYGTDRHCWLSLEGY-LILSFFIPVCIIVILNITVFIITVWK-LALK-----FSSL 641

  Fly   410 QERKQKLNSDKQTYTFFLRLFIIMGLSWSLEIGSYFSQSNQTWANVFLVADYLNWSQGIIIFILF 474
            .....||:..:......:....::|.||  ..|.:..|.|.|...::|.. .||..||.:|||:.
Zfish   642 NPDLSKLHKIRSFLATAVAQLCVLGGSW--VFGFFLFQKNGTEVMLYLFI-ILNSLQGALIFIMH 703

  Fly   475 VL----KRSTWRLLQERNHPKSTRSVISNRSMASRITVGTTPKNKARNSPL 521
            .|    .|..:|.|..|        :.||:.... .:|.:|..:.:...||
Zfish   704 CLLSKQVRVEYRSLFMR--------MCSNKKKGD-YSVSSTEPSHSSQKPL 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthNP_728521.1 Methuselah_N 29..209 CDD:429053
7tmB3_Methuselah-like 219..488 CDD:410632 69/276 (25%)
TM helix 2 247..269 CDD:410632 6/21 (29%)
TM helix 3 277..304 CDD:410632 9/26 (35%)
TM helix 4 321..341 CDD:410632 3/19 (16%)
TM helix 5 367..396 CDD:410632 9/28 (32%)
TM helix 6 418..445 CDD:410632 4/26 (15%)
TM helix 7 453..478 CDD:410632 9/28 (32%)
adgre5b.3XP_005160275.1 EGF_CA 32..>62 CDD:214542
EGF_CA 72..103 CDD:429571
EGF_CA <121..152 CDD:214542
EGF_CA 154..188 CDD:214542
GPS 416..460 CDD:197639
7tm_GPCRs 463..723 CDD:475119 70/286 (24%)
TM helix 1 466..490 CDD:410628 7/17 (41%)
TM helix 2 499..520 CDD:410628 6/20 (30%)
TM helix 3 530..552 CDD:410628 8/24 (33%)
TM helix 4 570..586 CDD:410628 2/21 (10%)
TM helix 5 605..628 CDD:410628 6/23 (26%)
TM helix 6 655..677 CDD:410628 4/23 (17%)
TM helix 7 682..707 CDD:410628 9/25 (36%)
Blue background indicates that the domain is not in the aligned region.

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