DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mth and adgrf7

DIOPT Version :10

Sequence 1:NP_728521.1 Gene:mth / 38058 FlyBaseID:FBgn0023000 Length:522 Species:Drosophila melanogaster
Sequence 2:XP_073789637.1 Gene:adgrf7 / 613165 ZFINID:ZDB-GENE-041001-214 Length:704 Species:Danio rerio


Alignment Length:584 Identity:113/584 - (19%)
Similarity:195/584 - (33%) Gaps:176/584 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 STVILVV--------LVIQKSYADILECDYFDTVDI-----------------------SAAQKL 43
            :||.::|        ::|.||   ::| |:..||||                       ||.:.:
Zfish   198 TTVEMLVNIASVSQNIIISKS---VME-DFLKTVDILVSNEATASWQSLTKENTSISLLSAVEDI 258

  Fly    44 QN----GSYL----------------FEG----------LLVPAILTGE----YDF----RILP- 69
            .|    ||:.                :.|          :|:|.||...    ..|    .||| 
Zfish   259 SNRLTEGSFTINQKYIELNRTVINNSYTGKSNLPNSATEILIPQILNPTSLTIIIFTTLNNILPT 323

  Fly    70 DDSKQKVARHIRGCVCKLKPCVRFCCPHDHIMDNGVCYDNMSDEELAELDPFLNVTLDDGSVSRR 134
            .||...:          :||.:|.         ||......:::.|..:....:.|  |.|:...
Zfish   324 QDSANGI----------VKPDMRI---------NGDLVVVKANQTLHSISFVFDTT--DQSLGNP 367

  Fly   135 H--FKNELIVQWDLPMPCDGMFYLDNREEQDKYTLFENGTFFRHFDRVTLRKREYCLQHLTFADG 197
            .  |.|..:..||    ..|......|.|....|...|     |....::....:.:.|:.||..
Zfish   368 QCVFWNFNLSAWD----STGCEVKPGRNETGIITCECN-----HTASFSILMSPFSIDHIAFAYV 423

  Fly   198 NATSIRIAPHNCLIVPSITGQTVVMISSLICMVLTIAVYLFVKKLQNLHGKCFICYMVCLFMGYL 262
            ....:.|                    |:.|::|.:.:...|.|....:...::.::..:.:...
Zfish   424 TYIGVGI--------------------SVACLILCLIIEAIVWKAVRRNDTSYMRHVSIVNIAIS 468

  Fly   263 FLLLDLWQI---SIS--------FCKPAGFLGYFFVMAAFFWLSVISLHL-WNTFRGSSHKANRF 315
            .|:.|:..|   :||        .|....|..:.|.:|.|||:.:.:|.| :......|..:...
Zfish   469 LLIADVCFIIGAAISKEQPTPADRCSSVVFFMHLFYLALFFWMLISALLLFYRVVMVLSQMSRAK 533

  Fly   316 LFEHRFLAYNTYAWGMAVVLTGITVLA----DNIVENQDWNPRVGHEGHCWIYTQAWSAMLYFYG 376
            :....||    ..:|..::::.|||.:    ...|..|          .||:.......:|.|..
Zfish   534 MMVIAFL----LGYGAPLLISVITVASTAGPQMYVSKQ----------ACWLNWNESRNLLAFVI 584

  Fly   377 PMVFLIAFNITMFILTAKRILGVKKDIQNFAHRQERKQKLNSDKQTYTFFLRLFIIMGLSWSLEI 441
            |.:.::|.|:.:||:...:|.   |.....|.:.:.|..| ...:...||... :..|::|...|
Zfish   585 PALTIVAINLVVFIVVLYKIF---KRRAGAATQPDWKNAL-VVARCVAFFTPA-LACGITWGFGI 644

  Fly   442 GSYFSQSNQTWANVF--LVADYLNWSQGIIIFILFVL-------KRSTWRLLQERNHPKSTRSV 496
            |:..|      |.:|  :|....|..||..|.:...|       :.:.|..|:..|....||.:
Zfish   645 GTTVS------AGLFVHVVFALFNSLQGFFILVFGTLLDSKVREELARWFSLRNLNSSSCTRMI 702

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthNP_728521.1 Methuselah_N 29..209 CDD:429053 44/243 (18%)
7tmB3_Methuselah-like 219..488 CDD:410632 59/293 (20%)
TM helix 2 247..269 CDD:410632 2/21 (10%)
TM helix 3 277..304 CDD:410632 8/27 (30%)
TM helix 4 321..341 CDD:410632 5/19 (26%)
TM helix 5 367..396 CDD:410632 7/28 (25%)
TM helix 6 418..445 CDD:410632 6/26 (23%)
TM helix 7 453..478 CDD:410632 8/33 (24%)
adgrf7XP_073789637.1 None

Return to query results.
Submit another query.