DRSC/TRiP Functional Genomics Resources

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Protein Alignment mth and adgrl3.1

DIOPT Version :10

Sequence 1:NP_728521.1 Gene:mth / 38058 FlyBaseID:FBgn0023000 Length:522 Species:Drosophila melanogaster
Sequence 2:XP_005170997.2 Gene:adgrl3.1 / 560631 ZFINID:ZDB-GENE-030131-7856 Length:1540 Species:Danio rerio


Alignment Length:335 Identity:78/335 - (23%)
Similarity:134/335 - (40%) Gaps:72/335 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 LIVPSITGQTVVMISSLICMVLTIAVYLFVKKLQN----LHGKCFICYMVCLFMGYLFLLLDLWQ 270
            |::..||  .|.::.||:|:::.|..:.|.:.||:    :|..      :|:   .||:...|:.
Zfish   868 LLLDVIT--WVGILLSLVCLLICIFTFCFFRGLQSDRNTIHKN------LCI---SLFIAETLFL 921

  Fly   271 ISIS------FCKPAGFLGYFFVMAAFFWLSVISLHLW----NTFRGSSHKANRFLFEHRFLAYN 325
            ..|:      .|.....|.:||.:|||.|:.:..:.|:    ..|.....:...|        |.
Zfish   922 TGINRADQPIVCAVFAALLHFFFLAAFTWMFLEGVQLYIMLVEVFESEYSRTKYF--------YL 978

  Fly   326 TYAWGMAVVLTGITVLADNIVENQDWNPRVGHEGHCWIYTQA---WSAMLYFYGPMVFLIAFNIT 387
            | .:|:..|:..::...|        ....|.|..||:....   ||    |.||...:|..|:.
Zfish   979 T-GYGVPAVIVAVSAAVD--------YRSYGTERVCWLRLDTYFIWS----FIGPATLIIMLNVI 1030

  Fly   388 MFILTAKRILGVKKDIQNFAHRQERKQK---LNSDKQTYTFFLRLFIIMGLSWSLEIGSYFSQSN 449
                    .||:.. .:.|.|....|..   |::.|......:.|..::||:|:..: .|.::|.
Zfish  1031 --------FLGIAL-YKMFHHTAILKPDSGCLDNIKSWVIGAIALLCLLGLTWAFGL-MYINEST 1085

  Fly   450 QTWANVFLVADYLNWSQGIIIFILFVL-----KRSTWRLLQERNHPKSTRSVISNRSMASRITVG 509
            ...|.:|.:   .|..||:.|||...:     ::...|.|  |.|..|.:||.|..|.:::.:..
Zfish  1086 VIMAYLFTI---FNSLQGMFIFIFHCILQKKVRKEYGRCL--RTHCCSGKSVESTISTSTKTSTA 1145

  Fly   510 TTPKNKARNS 519
            .||...:.||
Zfish  1146 RTPGRYSTNS 1155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthNP_728521.1 Methuselah_N 29..209 CDD:429053
7tmB3_Methuselah-like 219..488 CDD:410632 64/293 (22%)
TM helix 2 247..269 CDD:410632 3/21 (14%)
TM helix 3 277..304 CDD:410632 8/30 (27%)
TM helix 4 321..341 CDD:410632 4/19 (21%)
TM helix 5 367..396 CDD:410632 7/31 (23%)
TM helix 6 418..445 CDD:410632 5/26 (19%)
TM helix 7 453..478 CDD:410632 8/29 (28%)
adgrl3.1XP_005170997.2 None
Blue background indicates that the domain is not in the aligned region.

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