DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mth and Cirl

DIOPT Version :10

Sequence 1:NP_728521.1 Gene:mth / 38058 FlyBaseID:FBgn0023000 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_001260807.1 Gene:Cirl / 35846 FlyBaseID:FBgn0033313 Length:1711 Species:Drosophila melanogaster


Alignment Length:605 Identity:119/605 - (19%)
Similarity:223/605 - (36%) Gaps:204/605 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LVLRISTVILVVLVIQ----KSYADILECDYF----DTVDISAAQKLQNGSYLFEGLLVPAILTG 61
            :|.::..::|.|.|::    :|.....:.|.:    |.:::..|..:.|.    ||.||..:...
  Fly   563 VVQKVKNILLSVRVLETKTIQSSVVFPDSDQWPLSSDRIELPRAALIDNS----EGGLVRIVFAA 623

  Fly    62 EYDFRILPDDSKQKVARHIRGCVCKLKPCVRFCCPHDHI--------MDNGVCYDNMSDEELAEL 118
                    .|..:.:          |||      .:||.        :.|.....|.||....|:
  Fly   624 --------FDRLESI----------LKP------SYDHFDLKSSRSYVRNTAILSNDSDVNAGEI 664

  Fly   119 DPFLNV--------TLDDG---------SVSRRHFKNELI-----VQWDLPMPCDGMFYLDNREE 161
            ...|.:        :|..|         :::.:|.|.|.:     |.|:         |:|:...
  Fly   665 QQRLRILNSKVISASLGKGRHIQLSQPITLTLKHLKTENVTNPTCVFWN---------YIDHAWS 720

  Fly   162 QDKYTLFENGTFFRHFDRVTLRKREYC-LQHLT-FA-----------------DGNATSIRIAPH 207
            .:..:|           ..|.|....| ..||| ||                 |||   :||   
  Fly   721 ANGCSL-----------ESTNRTHSVCSCNHLTNFAILMDVVDEHQHSLFTMFDGN---MRI--- 768

  Fly   208 NCLIVPSITGQTVVMISSLICMV------LTIAVY--LFVKKLQ-NLHGKCFICYMVCLFMGYLF 263
                        .:.||..||:|      ||:.::  :|||..: :::...::|   .|.:..||
  Fly   769 ------------FIYISIGICVVFIVIALLTLKLFNGVFVKSARTSIYTSIYLC---LLAIELLF 818

  Fly   264 LL-LDLWQISISFCKPAGFLGYFF---VMAAFFWLSVISLHLWNTFRGSSHKANRFLFE----HR 320
            || ::..:.|| ||   ||:..|.   :::...|....:.|.::|.     .::..|.|    .:
  Fly   819 LLGIEQTETSI-FC---GFITIFLHCAILSGTAWFCYEAFHSYSTL-----TSDELLLEVDQTPK 874

  Fly   321 FLAYNTYAWGMAVVLTGITVLADNIVENQDWNPRVGHEGHCWIYTQAWSAMLY--FYGP-MVFLI 382
            ...|...::|:::.:..|:::.|.....|:        .:| :..:| :|:.|  |..| :||.:
  Fly   875 VNCYYLLSYGLSLSVVAISLVIDPSTYTQN--------DYC-VLMEA-NALFYATFVIPVLVFFV 929

  Fly   383 A---FNITMFILTAKRILGVKKDIQNFAHRQERKQKLNSDKQTYTFFLRL-FIIMGLSWSLEIGS 443
            |   :....:|:..::            .|...|.|.::...:..|.:|. |:.:.|..::...:
  Fly   930 AAIGYTFLSWIIMCRK------------SRTGLKTKEHTRLASVRFDIRCSFVFLLLLSAVWCSA 982

  Fly   444 YF----SQSNQTWANVFLVADY----LNWSQGIIIFILFVLKRSTWRLLQE-----RNH---PKS 492
            ||    ::.:...|:|:   .|    .|...|:.||:...::..  ::.:|     |.|   ||.
  Fly   983 YFYLRGAKMDDDTADVY---GYCFICFNTLLGLYIFVFHCIQNE--KIRREYRKYVRQHAWLPKC 1042

  Fly   493 TRSVISNRSMASRITVGTTP 512
            .|  .|..|::|.|..|..|
  Fly  1043 LR--CSKTSISSGIVTGNGP 1060

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthNP_728521.1 Methuselah_N 29..209 CDD:429053 43/232 (19%)
7tmB3_Methuselah-like 219..488 CDD:410632 60/305 (20%)
TM helix 2 247..269 CDD:410632 6/22 (27%)
TM helix 3 277..304 CDD:410632 5/29 (17%)
TM helix 4 321..341 CDD:410632 3/19 (16%)
TM helix 5 367..396 CDD:410632 9/34 (26%)
TM helix 6 418..445 CDD:410632 4/27 (15%)
TM helix 7 453..478 CDD:410632 7/28 (25%)
CirlNP_001260807.1 Gal_Rha_Lectin_dCirl 22..113 CDD:438687
GAIN 451..682 CDD:465137 26/146 (18%)
GPS 705..752 CDD:197639 13/66 (20%)
7tmB2_CELSR_Adhesion_IV 763..1035 CDD:320557 65/328 (20%)
TM helix 1 765..790 CDD:320557 10/42 (24%)
TM helix 2 801..823 CDD:320557 6/24 (25%)
TM helix 3 832..859 CDD:320557 5/26 (19%)
TM helix 4 875..895 CDD:320557 3/19 (16%)
TM helix 5 913..942 CDD:320557 8/28 (29%)
TM helix 6 960..987 CDD:320557 6/26 (23%)
TM helix 7 997..1022 CDD:320557 6/27 (22%)
Herpes_TAF50 <1219..1365 CDD:308764
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.