DRSC/TRiP Functional Genomics Resources

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Protein Alignment mth and mthl1

DIOPT Version :10

Sequence 1:NP_728521.1 Gene:mth / 38058 FlyBaseID:FBgn0023000 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_573140.1 Gene:mthl1 / 32637 FlyBaseID:FBgn0030766 Length:676 Species:Drosophila melanogaster


Alignment Length:404 Identity:100/404 - (24%)
Similarity:171/404 - (42%) Gaps:87/404 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 EYCLQHLTFADGN----------ATSIRIAPHNCLI---VPSITGQTV--------VMISSLICM 229
            :|||:| |..:|.          :::.....|:..|   :....||.:        :::|.:...
  Fly   281 QYCLEH-TQREGEVKIIACQHLFSSAAGAGIHDGSIGGTIEQANGQNLQKAVLTGGILVSIVFLS 344

  Fly   230 VLTIAVYLFVKKLQNLHGKCFICYMVCLFMGYLFLLLDLWQISISF------CKPAGFLGYFFVM 288
            ...:|.:|.......||.:|.|||:.||..|.:.|.::  ::|.|.      |........||.:
  Fly   345 ATLVAGFLLPAVHHALHWRCQICYVTCLLFGKILLAIE--ELSSSLQPGSAACHTLAITMQFFFL 407

  Fly   289 AAFFWLSVISLHLWNTFRG---SSHKANRFLFEHRFLAYNTYAWGMAVVLTGITVLADNIVENQD 350
            ||||||:.:..::|.|||.   ||.:.|:... .|:| |:.||||..:::|.:....|.:.|...
  Fly   408 AAFFWLNTMCFNIWWTFRDFRPSSLERNQEAL-RRYL-YSLYAWGGPLLITFVAACVDQLPETTL 470

  Fly   351 WNPRVGHEGHCWIYTQAWSAMLYFYGPMVFLIAFNITMFILTAKRI---LGVKKDIQNFAHRQER 412
            ..|..| :.:||...:..|...|||||:..|:..||.:|:.|..::   |..:.|:         
  Fly   471 LRPGFG-QLYCWFDNRNLSIFAYFYGPIGLLLCANIALFVSTTHQLTCGLWKRDDV--------- 525

  Fly   413 KQKLNSDKQTY-TFFLRLFIIMGLSWSLEIGSYFSQSNQTWANVFLVADYLNWSQGIIIFILFVL 476
              |.:|:|... ...|:|.::||::|..:|.|:......   .|:...|.:|..||:.|||:...
  Fly   526 --KSSSEKSALGRVCLKLVVVMGVTWIADILSWLVGGPH---GVWFFTDLINALQGVFIFIVVGC 585

  Fly   477 KRSTW----RLLQER------------NHPKSTRSV--------ISNRSMASRITVGTT----PK 513
            :...|    |:...|            .|..|::.:        |:..:..:..|..||    |.
  Fly   586 QPQVWTACRRIFCPRLRHDITNTTNGVQHSSSSQGLPSMAGGTEITQNTTTTTTTTNTTATHMPS 650

  Fly   514 NKARN-----SPLA 522
            |.|.:     :|:|
  Fly   651 NPAEDEVPEKAPIA 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthNP_728521.1 Methuselah_N 29..209 CDD:429053 7/32 (22%)
7tmB3_Methuselah-like 219..488 CDD:410632 79/305 (26%)
TM helix 2 247..269 CDD:410632 8/21 (38%)
TM helix 3 277..304 CDD:410632 9/26 (35%)
TM helix 4 321..341 CDD:410632 7/19 (37%)
TM helix 5 367..396 CDD:410632 11/28 (39%)
TM helix 6 418..445 CDD:410632 9/27 (33%)
TM helix 7 453..478 CDD:410632 8/24 (33%)
mthl1NP_573140.1 7tmB3_Methuselah-like 326..598 CDD:410632 78/290 (27%)
TM helix 1 327..352 CDD:410632 2/24 (8%)
TM helix 2 362..384 CDD:410632 8/23 (35%)
TM helix 3 396..423 CDD:410632 9/26 (35%)
TM helix 4 441..461 CDD:410632 8/20 (40%)
TM helix 5 485..515 CDD:410632 11/29 (38%)
TM helix 6 530..557 CDD:410632 8/26 (31%)
TM helix 7 562..587 CDD:410632 8/27 (30%)

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