DRSC/TRiP Functional Genomics Resources

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Protein Alignment mth and Adgrf5

DIOPT Version :10

Sequence 1:NP_728521.1 Gene:mth / 38058 FlyBaseID:FBgn0023000 Length:522 Species:Drosophila melanogaster
Sequence 2:XP_038938942.1 Gene:Adgrf5 / 245977 RGDID:621679 Length:1426 Species:Rattus norvegicus


Alignment Length:395 Identity:83/395 - (21%)
Similarity:155/395 - (39%) Gaps:88/395 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   183 RKREYC-LQHLTFADGNATSIRIAPHN---------CLIVPSITGQTVVMISSLICMVLTIAVYL 237
            |.|.:| ..|||     :.||.::|.:         .|.:.|..|....::|...|:|:...|:.
  Rat  1060 RDRVFCKCNHLT-----SFSIL
MSPDSPDPGSLLKILLDIISYIGLGFSIVSLAACLVVEAMVWK 1119

  Fly   238 FVKKLQNLHGK--CFICYMVCLFMGYLFLLLDLW------------QISISFCKPAGFLGYFFVM 288
            .|.|.:..:.:  |.:...:||      |:.|:|            .::.:.|..|.|..:||.:
  Rat  1120 SVTKNRTSYMRHICIVNIALCL------LIADIWFIVAGAIHDGHYPLNETACVAATFFIHFFYL 1178

  Fly   289 AAFFWLSVISLHLWNTFRGSSHKANRFLFEHRFLAYNTYAWGMAVVLTGITVLADNIVENQDWNP 353
            :.|||:..:.|.|:.......|.|::  ...:.:|: :..:|..::::.|||   .:.:.|:...
  Rat  1179 SVFFWMLTLGLMLFYRLIFILHDASK--STQKAIAF-SLGYGCPLIISSITV---GVTQPQEVYM 1237

  Fly   354 RVGHEGHCWIYTQAWSAMLYFYGPMVFLIAFNITMFILTAKRILGVKKDIQNFAHRQERKQKLNS 418
            |   :..||:..:...|:|.|..|.:.::..|:::.::...:||  :..:.:...:||:......
  Rat  1238 R---KNACWLNWEDTRALLAFAIPALIIVVVNVSITVVVITKIL--RPSVGDKPGKQEKSSLFQI 1297

  Fly   419 DKQTYTFFLRLFIIMGLSWSLEIGSYFSQSNQTWANVFLVADYLNWSQGIIIF------------ 471
            .|....    |..::||:|...:.:....||..:..:|.:   ||..||:.|.            
  Rat  1298 SKSIGV----LTPLLGLTWGFGLATVIQGSNAVFHIIFTL---LNAFQGLFILLFGCLWDQKVQE 1355

  Fly   472 -ILFVLKRSTWRLLQERNHPKST-----RSVISNRSMASR-------------ITVGTTPKNKAR 517
             :|.....|.|    ...|.|||     ..|.|..|..||             ::...|..:...
  Rat  1356 ALLHKFSLSRW----SSQHSKSTSLGSSTPVFSMSSPISRRFNNLFGKTGTYNVSTPETTSSSVE 1416

  Fly   518 NSPLA 522
            ||..|
  Rat  1417 NSSSA 1421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthNP_728521.1 Methuselah_N 29..209 CDD:429053 9/35 (26%)
7tmB3_Methuselah-like 219..488 CDD:410632 58/295 (20%)
TM helix 2 247..269 CDD:410632 5/23 (22%)
TM helix 3 277..304 CDD:410632 9/26 (35%)
TM helix 4 321..341 CDD:410632 4/19 (21%)
TM helix 5 367..396 CDD:410632 5/28 (18%)
TM helix 6 418..445 CDD:410632 5/26 (19%)
TM helix 7 453..478 CDD:410632 7/37 (19%)
Adgrf5XP_038938942.1 TM helix 6 1298..1320 CDD:410628 5/25 (20%)
TM helix 7 1325..1350 CDD:410628 6/27 (22%)
SEA 181..271 CDD:460188
IG_like 298..372 CDD:214653
Ig strand B 302..306 CDD:409353
Ig strand C 315..318 CDD:409353
Ig strand E 329..350 CDD:409353
ig 550..627 CDD:395002
Ig strand B 563..567 CDD:409353
Ig strand C 576..579 CDD:409353
Ig strand E 603..607 CDD:409353
Ig strand F 617..622 CDD:409353
GPS 1029..1076 CDD:460350 7/20 (35%)
7tm_GPCRs 1090..1363 CDD:475119 59/296 (20%)
TM helix 1 1092..1116 CDD:410628 6/23 (26%)
TM helix 2 1131..1152 CDD:410628 6/26 (23%)
TM helix 3 1167..1189 CDD:410628 7/21 (33%)
TM helix 4 1210..1226 CDD:410628 2/16 (13%)
TM helix 5 1248..1271 CDD:410628 5/22 (23%)
Blue background indicates that the domain is not in the aligned region.

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