DRSC/TRiP Functional Genomics Resources

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Protein Alignment mth and Adgre1

DIOPT Version :10

Sequence 1:NP_728521.1 Gene:mth / 38058 FlyBaseID:FBgn0023000 Length:522 Species:Drosophila melanogaster
Sequence 2:NP_034260.1 Gene:Adgre1 / 13733 MGIID:106912 Length:931 Species:Mus musculus


Alignment Length:582 Identity:126/582 - (21%)
Similarity:214/582 - (36%) Gaps:182/582 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 TLLVLRISTVILVVL---------VIQKSYADI------LECDYFDTVDISA-AQKLQNGSYLFE 51
            |:|:..:.:.:|..|         :||..|.||      .||...::::::| ..|:..|.::.:
Mouse   454 TILLETVESTMLAALLIPSGNASQMIQTEYLDIESKVINEECKENESINLAARGDKMNVGCFIIK 518

  Fly    52 GLLVPAILTGEYDFRILPDDSKQKVARHIRGCVCKLKPCVRFCCPHDHIMDNGVCYDNMSDEELA 116
                .::.||                          .|.|.|.                   ..|
Mouse   519 ----ESVSTG--------------------------APGVAFV-------------------SFA 534

  Fly   117 ELDPFLNVT-LDDGSVSRRHFKNELIVQWDLPMPCDGMFYLDNREEQDK---YTLFENGTFFRHF 177
            .::..||.. .:||...|:...|..:|        .|....:.:|:..|   |||       :|.
Mouse   535 HMESVLNERFFEDGQSFRKLRMNSRVV--------GGTVTGEKKEDFSKPIIYTL-------QHI 584

  Fly   178 DRVTLRKREYCLQHLT-FADGNATSIRIAPHNCLIVPSITGQTV-----------VMIS------ 224
            ......:|..|:...| ..||     |..|..|.||.:....||           :|.|      
Mouse   585 QPKQKSERPICVSWNTDVEDG-----RWTPSGCEIVEASETHTVCSCNRMANLAIIMASGELTME 644

  Fly   225 -------------SLICMVLTIAVYLFVKKLQNLHGKCFICYMVCLFMGYLFLL--LDLWQISIS 274
                         ||:|:.|.||.:|..:.:||.:....:...||||:..:..|  :|......:
Mouse   645 FSLYIISHVGTVISLVCLALAIATFLLCRAVQNHNTYMHLHLCVCLFLAKILFLTGIDKTDNQTA 709

  Fly   275 FCKPAGFLGYFFVMAAFFWLSVISLHLWNTFRGSSHKANRFLFEH-RFLAYNTYAWGMAVVLTGI 338
            ....||||.|.| :|.|||:.|.::.|:...| :....|.|...: :.|....:.:|:.|:   :
Mouse   710 CAIIAGFLHYLF-LACFFWMLVEAVMLFLMVR-NLKVVNYFSSRNIKMLHLCAFGYGLPVL---V 769

  Fly   339 TVLADNIVENQDWNPR-VGHEGHCWIYTQA---WSAMLYFYGPMVFLIAFNI-----TMFILTAK 394
            .:::.::      .|| .|....||:.|:.   ||    |.||:..:|..|.     |:::|..|
Mouse   770 VIISASV------QPRGYGMHNRCWLNTETGFIWS----FLGPVCMIITINSVLLAWTLWVLRQK 824

  Fly   395 RILGVKKDIQNFAHRQERKQKLNSDKQTYTF--FLRLFIIMGLSWSL---EIGSYFSQSNQTWAN 454
             :..|..::...           .|.:..||  ..::| |:|.||.|   :||...|    ..|.
Mouse   825 -LCSVSSEVSKL-----------KDTRLLTFKAIAQIF-ILGCSWVLGIFQIGPLAS----IMAY 872

  Fly   455 VFLVADYLNWSQGIIIFILFVL----KRSTWRLLQERNHPKSTRSVISNRSMASRITVGTTP 512
            :|.:   :|..||..||::..|    .|..::.|..|      ::.:|:.|..|.|.:.:.|
Mouse   873 LFTI---INSLQGAFIFLIHCLLNRQVRDEYKKLLTR------KTDLSSHSQTSGILLSSMP 925

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthNP_728521.1 Methuselah_N 29..209 CDD:429053 31/185 (17%)
7tmB3_Methuselah-like 219..488 CDD:410632 76/319 (24%)
TM helix 2 247..269 CDD:410632 6/23 (26%)
TM helix 3 277..304 CDD:410632 12/26 (46%)
TM helix 4 321..341 CDD:410632 3/19 (16%)
TM helix 5 367..396 CDD:410632 10/36 (28%)
TM helix 6 418..445 CDD:410632 11/31 (35%)
TM helix 7 453..478 CDD:410632 8/28 (29%)
Adgre1NP_034260.1 EGF_CA 33..63 CDD:238011
EGF_CA 81..115 CDD:214542
EGF_CA 133..172 CDD:214542
EGF_CA 173..>203 CDD:214542
EGF_CA 222..258 CDD:238011
EGF_CA 272..>301 CDD:214542
EGF_CA 319..352 CDD:214542
Cell attachment site. /evidence=ECO:0000255 506..508 0/1 (0%)
GPS 591..640 CDD:197639 14/53 (26%)
GPS. /evidence=ECO:0000255|PROSITE-ProRule:PRU00098 595..642 13/51 (25%)
7tmB2_EMR 644..906 CDD:320555 72/296 (24%)
TM helix 1 646..671 CDD:320555 6/24 (25%)
TM helix 2 680..702 CDD:320555 5/21 (24%)
TM helix 3 711..738 CDD:320555 12/27 (44%)
TM helix 4 755..775 CDD:320555 3/22 (14%)
TM helix 5 792..815 CDD:320555 7/26 (27%)
TM helix 6 839..864 CDD:320555 8/25 (32%)
TM helix 7 868..893 CDD:320555 9/31 (29%)
Blue background indicates that the domain is not in the aligned region.

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