DRSC/TRiP Functional Genomics Resources

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Protein Alignment mth and adgre5b.1

DIOPT Version :10

Sequence 1:NP_728521.1 Gene:mth / 38058 FlyBaseID:FBgn0023000 Length:522 Species:Drosophila melanogaster
Sequence 2:XP_005171094.1 Gene:adgre5b.1 / 100536657 ZFINID:ZDB-GENE-130116-3 Length:761 Species:Danio rerio


Alignment Length:272 Identity:62/272 - (22%)
Similarity:114/272 - (41%) Gaps:53/272 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 VVMISSLICMVLTIAVYLFVKKLQNLHGKCFICYMVCLFMGYLFLLLDLW----QISISFCKPAG 280
            |.::.||:|:.|.|..:.|.:.:|.......:...||||:..|..|..:.    |::.:..  ||
Zfish   479 VGLVLSLLCLFLCILTFRFCRSIQGTRNSIHLHLSVCLFIADLVFLCGISSTHNQVACAIV--AG 541

  Fly   281 FLGYFFVMAAFFWLSVISLHLWNTFRGSSHKANRFLFEHRFLAYNTYAWGMAVVLTGITVLADNI 345
            .| :||.::||.|:.:..:.|:.......|...:.|:.:      ...:|:.:|:..|:.:|   
Zfish   542 LL-HFFFLSAFCWMLLEGVQLYRMVVLVFHTTLKHLYMY------AVGYGVPLVIVSISAIA--- 596

  Fly   346 VENQDWNPRVGHEGHCWI---YTQAWSAMLYFYGPMVFLIAFNITMFILTAKRILGVKKDIQNFA 407
                 :....|.:.|||:   |...||    |..|:..:|..|..:|::|..::           
Zfish   597 -----FPKGYGTDRHCWLSLKYDFIWS----FLAPVCLIIGLNSLVFVITVWKL----------- 641

  Fly   408 HRQERKQKLNSDKQ--------TYTFFLRLFIIMGLSWSLEIGSYFSQSNQTWANVFLVADYLNW 464
              .|:...||.|..        |.|...:|.::.|: |......::.:..|....:|::   ||.
Zfish   642 --AEKFSSLNPDLSKLRTIRGFTVTAVAQLCVLGGM-WIFGSFLFYEKVTQVALYLFVI---LNS 700

  Fly   465 SQGIIIFILFVL 476
            .||.:|||:..|
Zfish   701 LQGALIFIMHCL 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthNP_728521.1 Methuselah_N 29..209 CDD:429053
7tmB3_Methuselah-like 219..488 CDD:410632 62/272 (23%)
TM helix 2 247..269 CDD:410632 6/21 (29%)
TM helix 3 277..304 CDD:410632 9/26 (35%)
TM helix 4 321..341 CDD:410632 3/19 (16%)
TM helix 5 367..396 CDD:410632 8/28 (29%)
TM helix 6 418..445 CDD:410632 6/34 (18%)
TM helix 7 453..478 CDD:410632 9/24 (38%)
adgre5b.1XP_005171094.1 EGF_CA 34..67 CDD:214542
EGF_CA 81..112 CDD:429571
EGF_CA 124..153 CDD:214542
EGF_CA 162..193 CDD:429571
GAIN 227..392 CDD:465137
GPS 422..467 CDD:197639
7tm_GPCRs 470..730 CDD:475119 62/272 (23%)
TM helix 1 473..497 CDD:410628 6/17 (35%)
TM helix 2 506..527 CDD:410628 6/20 (30%)
TM helix 3 537..559 CDD:410628 8/24 (33%)
TM helix 4 577..593 CDD:410628 2/21 (10%)
TM helix 5 612..635 CDD:410628 7/26 (27%)
TM helix 6 662..684 CDD:410628 5/22 (23%)
TM helix 7 689..714 CDD:410628 10/27 (37%)
Blue background indicates that the domain is not in the aligned region.

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