DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl9 and Pdfr

DIOPT Version :10

Sequence 1:NP_612029.1 Gene:mthl9 / 38056 FlyBaseID:FBgn0035131 Length:513 Species:Drosophila melanogaster
Sequence 2:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster


Alignment Length:522 Identity:92/522 - (17%)
Similarity:145/522 - (27%) Gaps:244/522 - (46%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 VIDGVEYRAKKHLRGCVCLLKPCISFCCPE--------NLVFDAKHWNCTMPHQVRESTHVE--- 120
            |:|||       .|.....|:|.:....|:        ||...|. ||.|:....  :|:.|   
  Fly   147 VLDGV-------ARVAQLALEPTVMDALPDSDTEQVLGNLNSSAP-WNLTLASAA--ATNFENCS 201

  Fly   121 LTYANRTVDQVRIRDRFVVRTELGCRNKFVDKKHDNFWQWDLF------ENGTLRR--------- 170
            ..:.|.|:.|          |.|.|.           |.||..      ..|.|.|         
  Fly   202 ALFVNYTLPQ----------TGLYCN-----------WTWDTLLCWPPTPAGVLARMNCPGGFHG 245

  Fly   171 -------------DNRLWSTDEYCFSPLEHNPEQW---------ELTPLNCERFQTGYRVW---- 209
                         |.| |.:..   :..|.||..|         |:..|..:.....:..:    
  Fly   246 VDTRKFAIRKCELDGR-WGSRP---NATEVNPPGWTDYGPCYKPEIIRLMQQMGSKDFDAYIDIA 306

  Fly   210 -------IYAIC-SIIAIIINIFILSLLGSVRDARKSHYGQLIIYYLLSMIV------------- 253
                   |..:| |:.|:|:::.|.....|:|:.|...:..|.:..:|.:|:             
  Fly   307 RRTRTLEIVGLCLSLFALIVSLLIFCTFRSLRNNRTKIHKNLFVAMVLQVIIRLTLYLDQFRRGN 371

  Fly   254 ---------------------GYSLLVY-------------LALKN------------------- 265
                                 .|.||.|             |.|.|                   
  Fly   372 KEAATNTSLSVIENTPYLCEASYVLLEYARTAMFMWMFIEGLYLHNMVTVAVFQGSFPLKFFSRL 436

  Fly   266 ----PMKLSHVACR---------------NIGFLAYF---------CIMLSFVFLAICSLDFLLK 302
                |:.::.|..|               |.....|:         .|:|:|.||.......::|
  Fly   437 GWCVPILMTTVWARCTVMYMDTSLGECLWNYNLTPYYWILEGPRLAVILLNFCFLVNIIRVLVMK 501

  Fly   303 FKQ----------KAVRSSVRRLSLALAVLAVIGLRFLVSLAQDSKLPKHFKPGMGEDYCWFDVR 357
            .:|          ||||:       |:.:|.::|:..|:......|...:|.           |.
  Fly   502 LRQSQASDIEQTRKAVRA-------AIVLLPLLGITNLLHQLAPLKTATNFA-----------VW 548

  Fly   358 TWG------------ILIYYY--GPIALLLIFSIVCCLKA-------------YFSIYELPPDTQ 395
            ::|            .|||.:  |.:..:|:.|:...|..             |...|...|||.
  Fly   549 SYGTHFLTSFQGFFIALIYCFLNGEVRAVLLKSLATQLSVRGHPEWAPKRASMYSGAYNTAPDTD 613

  Fly   396 YI 397
            .:
  Fly   614 AV 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl9NP_612029.1 Methuselah_N 29..199 CDD:429053 37/179 (21%)
7tmB3_Methuselah-like 232..473 CDD:410632 48/297 (16%)
TM helix 2 241..263 CDD:410632 8/68 (12%)
TM helix 3 275..302 CDD:410632 8/50 (16%)
TM helix 4 314..334 CDD:410632 4/19 (21%)
TM helix 5 358..387 CDD:410632 9/55 (16%)
TM helix 6 404..431 CDD:410632
TM helix 7 440..465 CDD:410632
PdfrNP_001245501.1 HRM 213..272 CDD:397086 12/73 (16%)
7tmB1_PDFR 306..584 CDD:320389 49/295 (17%)
TM helix 1 308..333 CDD:320389 6/24 (25%)
TM helix 2 342..364 CDD:320389 3/21 (14%)
TM helix 3 391..418 CDD:320389 6/26 (23%)
TM helix 4 430..450 CDD:320389 2/19 (11%)
TM helix 5 469..498 CDD:320389 6/28 (21%)
TM helix 6 512..539 CDD:320389 8/33 (24%)
TM helix 7 546..571 CDD:320389 5/35 (14%)
Blue background indicates that the domain is not in the aligned region.

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