DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atac3 and DDX54

DIOPT Version :9

Sequence 1:NP_001246531.1 Gene:Atac3 / 38055 FlyBaseID:FBgn0052343 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001104792.1 Gene:DDX54 / 79039 HGNCID:20084 Length:882 Species:Homo sapiens


Alignment Length:539 Identity:116/539 - (21%)
Similarity:182/539 - (33%) Gaps:162/539 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 TPLHLACYYGHERIVSLLLALKCSVNSRDMLRMTP---LHWAVEKKHKGIVRLLLKCQADVTLVS 182
            |.|..|...|.:|:.....||.   .:.|::..||   :|.|||        :.||.|:      
Human   193 TGLKTALILGGDRMEDQFAALH---ENPDIIIATPGRLVHVAVE--------MSLKLQS------ 240

  Fly   183 KFGKTPIGLAVYTEQADVLAELEAARQAQ-ASKKLHEESEQQAHKT-------KKETNEAVSSIM 239
                  :...|: ::||.|.|:..|.|.| ...:|     ...|:|       .|...|...:.:
Human   241 ------VEYVVF-DEADRLFEMGFAEQLQEIIARL-----PGGHQTVLFSATLPKLLVEFARAGL 293

  Fly   240 DEPEVIKTVDDKEMSVEERMD-----VLENMRGHA------NVLR---NTALYILKTHEIADMVQ 290
            .||.:|:.  |.:..:.|::.     |.|:.:...      ||:|   .|.:::...|..     
Human   294 TEPVLIRL--DVDTKLNEQLKTSFFLVREDTKAAVLLHLLHNVVRPQDQTVVFVATKHHA----- 351

  Fly   291 DNDDEDSKEMLNTALQNGRQLVLSEGGRMLLHETKSGIS------GKQS----TNGNARPSVAAL 345
                |...|:|.|      |.|........|..|...|:      ||.|    |:..||.....|
Human   352 ----EYLTELLTT------QRVSCAHIYSALDPTARKINLAKFTLGKCSTLIVTDLAARGLDIPL 406

  Fly   346 RTNV-NNSHPKIRMNVLKQKDLPSPAG--------VAKNKNIRIISLTDFKKLYGSDSTAKSLQK 401
            ..|| |.|.|......|.:....:.||        ||.::   |..|.|.....|...|.....|
Human   407 LDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDE---IPYLLDLHLFLGRSLTLARPLK 468

  Fly   402 IPASLAS-SGMVRHLPDGTKLVNMRQLQA---RQLKLPSLQRPQDLTALEESHSQNEAAVPSPLP 462
            .|:.:|. .||:..:|..........||:   ..|:|..|.|..|     .:..|...:.|:|.|
Human   469 EPSGVAGVDGMLGRVPQSVVDEEDSGLQSTLEASLELRGLARVAD-----NAQQQYVRSRPAPSP 528

  Fly   463 SG--------------HPASGSSLRGQVGTVQTIQLRPSLSAGSGQGAVNNGAAPGKTIVNATKQ 513
            ..              ||...|  |.:...:|.::|..|:.....:..:..        :||   
Human   529 ESIKRAKEMDLVGLGLHPLFSS--RFEEEELQRLRLVDSIKNYRSRATIFE--------INA--- 580

  Fly   514 SPKSPNVMPLLTSSEICRQLHELRRQNEDLRRRADSFQREKEEMLRRIDRLEQM----------- 567
                       :|.::|.|:...:||.:  |:....||:.::      .|.||.           
Human   581 -----------SSRDLCSQVMRAKRQKD--RKAIARFQQGQQ------GRQEQQEGPVGPAPSRP 626

  Fly   568 VLVQ---ESEADLDFGEDV 583
            .|.:   |.|.:.:.||.|
Human   627 ALQEKQPEKEEEEEAGESV 645

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atac3NP_001246531.1 Ank_4 58..106 CDD:290365
ANK repeat 58..83 CDD:293786
ANK 81..204 CDD:238125 21/85 (25%)
ANK repeat 88..116 CDD:293786
Ank_2 90..181 CDD:289560 17/62 (27%)
ANK repeat 118..149 CDD:293786 7/27 (26%)
ANK repeat 151..181 CDD:293786 9/32 (28%)
ANK repeat 184..211 CDD:293786 7/26 (27%)
DDX54NP_001104792.1 PRK01297 1..469 CDD:234938 73/324 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..78
Q motif 96..124
DEADc 98..300 CDD:238167 32/135 (24%)
DEAD box 247..250 0/2 (0%)
HELICc 315..441 CDD:238034 31/140 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 596..698 12/58 (21%)
Interaction with nuclear receptors 605..647 10/47 (21%)
DBP10CT 714..774 CDD:285373
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0337
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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