DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atac3 and gabpb2

DIOPT Version :10

Sequence 1:NP_001246531.1 Gene:Atac3 / 38055 FlyBaseID:FBgn0052343 Length:583 Species:Drosophila melanogaster
Sequence 2:XP_017951779.1 Gene:gabpb2 / 733936 XenbaseID:XB-GENE-955082 Length:392 Species:Xenopus tropicalis


Alignment Length:469 Identity:130/469 - (27%)
Similarity:205/469 - (43%) Gaps:109/469 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 VDLGKQLLQCARDSDVAGVKAALAHGAPFASDWLGMSALHFAAMNNQLEICEILLQGGINMDGKT 116
            :||||:||:.||..:...::..:.:||||.:||||.|.||.||........::|||.||:.|.:|
 Frog     3 LDLGKRLLEAARCGEDNEIRLLMQNGAPFTTDWLGTSPLHLAAQYGHYSTVKVLLQAGISRDART 67

  Fly   117 KVDRTPLHLACYYGHERIVSLLLALKCSVNSRDMLRMTPLHWAVEKKHKGIVRLLLKCQADVTLV 181
            ||||||||:|...||..||.||:....:||:||||.||.||||.|..|..:|.||:|..|||...
 Frog    68 KVDRTPLHMAAADGHTPIVDLLIKNGANVNARDMLEMTALHWASEHNHHDVVHLLIKSGADVNSY 132

  Fly   182 SKFGKTPIGLAVYTEQADVLAELEAARQAQASKKLHEESEQQAHKTKKETNEAVSSIMDEPEVIK 246
            :|||||||.:|:.....::|..::.|.|.:.             :|::....:|||    |:.| 
 Frog   133 NKFGKTPIDIALDKNNHELLVTMQEALQGKP-------------RTRRPNVISVSS----PQYI- 179

  Fly   247 TVDDKEMSVEERMDVLENMRGHANVLRNTALYILKTH----EIADMVQDNDDEDSKEMLNTALQN 307
                              :...|||        ..:|    |:..:     |...::|    :||
 Frog   180 ------------------LAPVANV--------KSSHGQGAEVVTL-----DPSVQQM----VQN 209

  Fly   308 GRQLVL---SEGGRMLLHETKSGISGKQSTNGNARPSVAALRTNVNNSHPK-------------I 356
            |.|.|:   ::|.::      ..:.|:.|........:..::.....|.|.             :
 Frog   210 GGQRVITIVTDGIQL------GSLQGQLSVGSLCSAPLVTIQNGAEGSLPNAHSLAVEVAEEQVV 268

  Fly   357 RMNVLKQKDLPSPAGVAKNKNIRIISLTDFKKLYGSDSTAKSL---QKIPASLASSGMVRHLPDG 418
            ...|:.:...|||..    |..|:.|:...:...|:...|:.|   |...|:|.:....:.|.: 
 Frog   269 EETVVVEVSPPSPPA----KKYRVTSVATEEGPEGNRVQARQLLEQQLKEANLRAREFRQQLRE- 328

  Fly   419 TKLVNMRQLQARQLKLPSLQRPQ----DLTALEESHSQNEAAVPSPLPSGHPASGSSLRG-QVGT 478
                ..::.:|.::||.||:|.|    ..|.:||    .:..:         .|...|.| :|..
 Frog   329 ----KEQEAEAYRVKLESLERQQVNGDSFTVVEE----GDTII---------VSAEELAGVEVTE 376

  Fly   479 VQTIQLRPSLSAGS 492
            |:|::....:.|.|
 Frog   377 VETVEQHCDIPAES 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atac3NP_001246531.1 ANKYR <58..251 CDD:440430 77/192 (40%)
ANK repeat 58..83 CDD:293786 8/24 (33%)
ANK repeat 88..116 CDD:293786 11/27 (41%)
ANK repeat 118..149 CDD:293786 16/30 (53%)
ANK repeat 151..181 CDD:293786 16/29 (55%)
ANK repeat 184..211 CDD:293786 10/26 (38%)
gabpb2XP_017951779.1 ANKYR <9..159 CDD:440430 69/149 (46%)
ANK repeat 9..34 CDD:293786 8/24 (33%)
ANK repeat 37..67 CDD:293786 12/29 (41%)
ANK repeat 69..100 CDD:293786 16/30 (53%)
ANK repeat 102..130 CDD:293786 15/27 (56%)

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