DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atac3 and Ddx54

DIOPT Version :9

Sequence 1:NP_001246531.1 Gene:Atac3 / 38055 FlyBaseID:FBgn0052343 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_082317.1 Gene:Ddx54 / 71990 MGIID:1919240 Length:874 Species:Mus musculus


Alignment Length:598 Identity:115/598 - (19%)
Similarity:194/598 - (32%) Gaps:209/598 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 NSRDMLRMTPLHWAVEKKHK---GIVRLLLKCQADVTLVSKFGK--TPI---GLAVYTEQADVLA 202
            ::|:|:|      |..||.|   |...:.|.......::.|..|  |||   .:.|..:..||:|
Mouse    79 DTREMVR------AQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVA 137

  Fly   203 -----------------ELEAARQAQASKK--LHEESEQQAHKTKKETNEAVSSIMDEPEVIKT- 247
                             |...||.||...:  :...:.:.|.:|.|.|.|     :.:...:|| 
Mouse   138 MARTGSGKTACFLLPMFERLKARSAQTGARALILSPTRELALQTMKFTKE-----LGKFTGLKTA 197

  Fly   248 -------VDDKEMSVEERMDVLENMRG---HANVLRNTALYILKTHEIADMVQDNDD-------- 294
                   ::|:..::.|..|::....|   |..|..|     ||...:..:|.|..|        
Mouse   198 LILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMN-----LKLQSVEYVVFDEADRLFEMGFA 257

  Fly   295 EDSKEMLNTALQNGRQLVLSEG--GRMLLHETKSGISG--------KQSTNGNARPSVAALRTNV 349
            |..:|::. .|..|.|.||...  .::|:...::|::.        ....|...:.|...:|.:.
Mouse   258 EQLQEIIG-RLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIRLDVDSKLNEQLKTSFLLVREDT 321

  Fly   350 NNS-HPKIRMNVLKQKD-----------------LPSPAGV-------AKNKNIRIISLTDF--- 386
            ..: ...:..||::.:|                 |....||       |.::..|.|:|..|   
Mouse   322 KAAVLLYLLQNVVRPQDQTVVFVATKHHAEYLTELLMGQGVSCAHIYSALDQTARKINLAKFTHN 386

  Fly   387 --KKLYGSDSTAKSLQ----------KIPA----------------------SLASSGMVRHLPD 417
              ..|..:|..|:.|.          ..||                      ||.:...|.:|.|
Mouse   387 KCSTLIVTDLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEVPYLLD 451

  Fly   418 GTKLVNMRQLQARQLKLPSL-----------QRPQDLTALEESHSQ----------------NEA 455
            ....:......||..:.||:           :.||.:...|:|..|                |.|
Mouse   452 LHLFLGRSVTLARPCEEPSVADAVGRDGVLGRVPQSVVDDEDSSLQTAMGASLDLQGLHRVANNA 516

  Fly   456 ------AVPSPLPSG--------------HPASGSSLRGQVGTVQTIQLRPSLSAGSGQGAVNNG 500
                  :.|:|.|..              ||...|..  :.|.:|.::|..|:.....:..:.. 
Mouse   517 QQQYVRSRPAPSPESIKRAKELDLAELGLHPLFSSCF--EEGELQRLRLVDSIKNYRTRTTIFE- 578

  Fly   501 AAPGKTIVNATKQSPKSPNVMPLLTSSEICRQLHELRRQNEDLRRRADSFQREKEEMLR-RIDRL 564
                   :||:.:.|.|              |:...:||.:  |:...|||:.::|... ..|..
Mouse   579 -------INASSKDPSS--------------QMMRAKRQRD--RKAVASFQQRRQERQEGPADPA 620

  Fly   565 EQMVLVQESEADL 577
            .|..|.||.|.::
Mouse   621 PQRELPQEEEEEM 633

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atac3NP_001246531.1 Ank_4 58..106 CDD:290365
ANK repeat 58..83 CDD:293786
ANK 81..204 CDD:238125 18/82 (22%)
ANK repeat 88..116 CDD:293786
Ank_2 90..181 CDD:289560 9/37 (24%)
ANK repeat 118..149 CDD:293786 0/2 (0%)
ANK repeat 151..181 CDD:293786 7/32 (22%)
ANK repeat 184..211 CDD:293786 11/48 (23%)
Ddx54NP_082317.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..76
SrmB 69..537 CDD:223587 90/474 (19%)
Q motif 95..123 7/27 (26%)
DEADc 97..299 CDD:238167 43/212 (20%)
DEAD box 246..249 1/2 (50%)
HELICc 314..440 CDD:238034 18/125 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 581..687 17/69 (25%)
DBP10CT 706..766 CDD:285373
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 712..874
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0337
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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