DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atac3 and GABPB2

DIOPT Version :10

Sequence 1:NP_001246531.1 Gene:Atac3 / 38055 FlyBaseID:FBgn0052343 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001310839.1 Gene:GABPB2 / 126626 HGNCID:28441 Length:464 Species:Homo sapiens


Alignment Length:461 Identity:124/461 - (26%)
Similarity:193/461 - (41%) Gaps:105/461 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 VDLGKQLLQCARDSDVAGVKAALAHGAPFASDW----------------LGMSALHFAAMNNQLE 100
            |||||:||:.||......|:..:|:||||.:||                ||.|.||.||......
Human     4 VDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWFSKLRVSCGYIGDNCKLGTSPLHLAAQYGHYS 68

  Fly   101 ICEILLQGGINMDGKTKVDRTPLHLACYYGHERIVSLLLALKCSVNSRDMLRMTPLHWAVEKKHK 165
            ..|:||:.|::.|.:|||||||||:|...||..||.||:.....||::|||:||.||||.|:.|:
Human    69 TAEVLLRAGVSRDARTKVDRTPLHMAAADGHAHIVELLVRNGADVNAKDMLKMTALHWATERHHR 133

  Fly   166 GIVRLLLKCQADVTLVSKFGKTPIGLAVYTEQADVLAELEAARQAQASKKLHEESEQQAHKTKKE 230
            .:|.||:|..|||...|||.|:...:|:....|::|..|:.|.|.|.:     .:.::|:.....
Human   134 DVVELLIKYGADVHAFSKFDKSAFDIALEKNNAEILVILQEAMQNQVN-----VNPERANPVTDP 193

  Fly   231 TNEAVSSIMDEPEV------IKTVDDKEMSVEERMDVLENMRGHANVLRNTA------LYILKTH 283
            .:.|...|....||      |.:.:.|..|.:.....::......:||...|      :.:..:|
Human   194 VSMAAPFIFTSGEVVNLASLISSTNTKTTSGDPHASTVQFSNSTTSVLATLAALAEASVPLSNSH 258

  Fly   284 EIADMVQDNDDEDSKEML-NTALQNGRQLVLSEGGRMLLHETKSG-----ISGKQSTNGNARPSV 342
            ...        .:::|:: ..::.:..|.|:..||:.::.....|     |.....|.|..:|.:
Human   259 RAT--------ANTEEIIEGNSVDSSIQQVMGSGGQRVITIVTDGVPLGNIQTSIPTGGIGQPFI 315

  Fly   343 AALRTNVNNSHPKIRMNVLKQKDLPSPAGVAKNKNIRIISLTDFKKLYGSDSTAKSLQKIPASLA 407
            ..::..              |:.|..|||....:.  :|...:.:||        .|.|.|....
Human   316 VTVQDG--------------QQVLTVPAGKVAEET--VIKEEEEEKL--------PLTKKPRIGE 356

  Fly   408 SSGMVRHLPDGTKLVNMRQLQARQ--------------------------LKLPSLQRPQ----D 442
            .:..|....:|    |.|:|..:|                          |||.::.|.|    |
Human   357 KTNSVEESKEG----NERELLQQQLQEANRRAQEYRHQLLKKEQEAEQYRLKLEAIARQQPNGVD 417

  Fly   443 LTALEE 448
            .|.:||
Human   418 FTMVEE 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atac3NP_001246531.1 ANKYR <58..251 CDD:440430 77/214 (36%)
ANK repeat 58..83 CDD:293786 10/24 (42%)
ANK repeat 88..116 CDD:293786 10/27 (37%)
ANK repeat 118..149 CDD:293786 16/30 (53%)
ANK repeat 151..181 CDD:293786 16/29 (55%)
ANK repeat 184..211 CDD:293786 8/26 (31%)
GABPB2NP_001310839.1 ANKYR <10..189 CDD:440430 72/183 (39%)
ANK repeat 10..35 CDD:293786 10/24 (42%)
ANK repeat 54..84 CDD:293786 11/29 (38%)
ANK repeat 86..117 CDD:293786 16/30 (53%)
ANK repeat 119..148 CDD:293786 16/28 (57%)
ANK repeat 152..185 CDD:293786 9/37 (24%)

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