Sequence 1: | NP_612024.4 | Gene: | RhoGEF3 / 38050 | FlyBaseID: | FBgn0264707 | Length: | 3519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_013292.1 | Gene: | PEX13 / 850888 | SGDID: | S000004181 | Length: | 386 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 474 | Identity: | 99/474 - (20%) |
---|---|---|---|
Similarity: | 161/474 - (33%) | Gaps: | 147/474 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 2510 AVPGPQ-------LRSLEKSNPSWTFLCSGIASICQPVQQTETDHSTAQEAAEEDIVIRKVKPNK 2567
Fly 2568 SRRTGRSRSLPSVMLRRLYLAGMPKPGSNEMGTTSDCAASLSQQIKAVSSPTLSEPCLEEQPQKG 2632
Fly 2633 TESTDVANTGSSAGSG-----GLGVLQKFKRTLNNFNNKNQLHISPLSPAAVGNNAPKTKTSPTT 2692
Fly 2693 TTASIAPMITTTTASDPGSEAGDTSS--GKYRFGPLIWRSSKERRKTKYNRRDKCNSGDSGIQIE 2755
Fly 2756 LEQDEQYSRATMAVSRQDEPRAFALTNGS-------------CGVALSKMRAIRRTNSAK----- 2802
Fly 2803 ASSILG-PFIVKTKIAKHLNIGESDKAERKAPESLPTRSLSQPNGLESYGMGRPDLEDSDSDSVA 2866
Fly 2867 SNEEAISFYPTTYAEVLYNFTAGGPQ-ELGLERGMLIEILRKE--VG---PWWFGRIKKEETNLV 2925
Fly 2926 EDILGPELGWFPKEFVRII 2944 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF3 | NP_612024.4 | DUF4802 | <754..>790 | CDD:292678 | |
SH3 | 2876..2942 | CDD:214620 | 18/71 (25%) | ||
RhoGEF | 3031..3235 | CDD:279015 | |||
PH_Collybistin_ASEF | 3240..3373 | CDD:269931 | |||
PH | <3285..3363 | CDD:278594 | |||
PEX13 | NP_013292.1 | Peroxin-13_N | 140..283 | CDD:397970 | 39/185 (21%) |
SH3_Pex13p_fungal | 310..369 | CDD:212705 | 18/69 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1291 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |