DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGEF3 and Arhgef38

DIOPT Version :10

Sequence 1:NP_612024.4 Gene:RhoGEF3 / 38050 FlyBaseID:FBgn0264707 Length:3519 Species:Drosophila melanogaster
Sequence 2:NP_001355681.1 Gene:Arhgef38 / 77669 MGIID:1924919 Length:770 Species:Mus musculus


Alignment Length:508 Identity:108/508 - (21%)
Similarity:191/508 - (37%) Gaps:145/508 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  2991 TVTTDQSNVT-----LIVIESPPTPSAPSVDFVAQPDHSTIIRRS-------------------- 3030
            |:.:.:.|:|     |.::|...|.:.  ||.....|||..:|||                    
Mouse    11 TMGSKKKNLTFLRSRLYMLERRKTDTV--VDSSVSGDHSGSLRRSQSDRTEYNQKLQEKMTPQAE 73

  Fly  3031 ------------------------AVRELLDTEVNYVKLLAAIC--DGYLPAMSKRIDIFSPNSI 3069
                                    .:|||:.||.:|:..| .:|  :...|..||:||..   .:
Mouse    74 CSSAETPTPEDEQQVGRMMAKRAKIIRELIQTERDYLTDL-ELCLREVVQPLRSKQIDRL---DV 134

  Fly  3070 RLIFSNITAIYKFQRKFLEALRRGIEQNQ-----VAKVFLKMHKGFL--CYSTYCNAYPRALIEL 3127
            ..:||||.::::...|.|..|.......:     :.:|||:: ||.|  .|..||..:..|...|
Mouse   135 EGLFSNIESVHQISAKLLSLLEEATTDVEPAMQVIGEVFLQI-KGPLEDIYKIYCYHHDEAHSVL 198

  Fly  3128 ETYDRVKDARTILENCRES----------QNLAELPLSAHLLAPVQRICRYPLHLNEIIKSALEK 3182
            |:|::.::.:..|.:|.:|          .||  |.:.:.::.|:||:.:|||.|.|:..|    
Mouse   199 ESYEKEEELKQHLSHCLQSLKNIYLQEGKPNL--LDMGSLMIKPIQRVMKYPLLLCELRNS---- 257

  Fly  3183 GAKEGNDTDGAKSAGKTTDYEQLDVTELDIPDSQDTVNLALEAMRGITEAVNEGKRHSETIARHQ 3247
                                     |....||.: .:..|..|::.|...:||.||..:.:.:::
Mouse   258 -------------------------TPPSHPDYR-ALGEAFAAVKDINVNINELKRRKDLVLKYK 296

  Fly  3248 ASFQ----NFKGPPLHLHSAR----------FFLQVDATRQKQNLWNSSYTLF--------LFDN 3290
            .:.:    ..|...|::||..          ..|....::.|.|.:|....||        |...
Mouse   297 KNEEEESLKDKLSKLNIHSISKKSKRVTNHLKILTRGESQVKDNTFNREEKLFRSLEKTVRLCVK 361

  Fly  3291 QLVYCKRDIIKRSHFIYKGRIFLDRCRVVNVRDGKMFGHTIKNSLRIYSESRDKWYDFSFRSANR 3355
            .:..|.:.|.:.:.|..:....|   |.::.:||:      ||......::...:.||:.||   
Mouse   362 NISSCLQHIEEATPFTLQSGAEL---REISYQDGE------KNGTEPQDQASKPYQDFAARS--- 414

  Fly  3356 KHRFLSTL-ALERQFGGKALYVSEMTG--FEYNYEERPGDYSDQSDYDAQDFE 3405
            :...|:.| ||...|.|....:.:...  .:|| ...|...:.:||...:::|
Mouse   415 QRLILNPLSALLSLFPGPQKLIQKRYDKLLDYN-SSLPRSATTESDLAKREYE 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF3NP_612024.4 SH3 2876..2942 CDD:214620
RhoGEF 3028..3234 CDD:238091 57/268 (21%)
PH_Collybistin_ASEF 3240..3373 CDD:269931 30/155 (19%)
Arhgef38NP_001355681.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 33..88 9/56 (16%)
RhoGEF 98..283 CDD:459876 54/221 (24%)
BAR_DNMBP 336..510 CDD:153273 31/144 (22%)
SH3 585..641 CDD:473055
SH3_DNMBP_C2 710..766 CDD:213017
Blue background indicates that the domain is not in the aligned region.

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