DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGEF3 and Dnmbp

DIOPT Version :9

Sequence 1:NP_612024.4 Gene:RhoGEF3 / 38050 FlyBaseID:FBgn0264707 Length:3519 Species:Drosophila melanogaster
Sequence 2:NP_082305.1 Gene:Dnmbp / 71972 MGIID:1917352 Length:1580 Species:Mus musculus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF3NP_612024.4 DUF4802 <754..>790 CDD:292678
SH3 2876..2942 CDD:214620
RhoGEF 3031..3235 CDD:279015
PH_Collybistin_ASEF 3240..3373 CDD:269931
PH <3285..3363 CDD:278594
DnmbpNP_082305.1 SH3_DNMBP_N1 7..56 CDD:212728
SH3_DNMBP_N2 70..124 CDD:212729
SH3_DNMBP_N3 150..200 CDD:212730
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 211..245
SH3 248..297 CDD:302595
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 304..446
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 500..546
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 589..688
RhoGEF 787..969 CDD:279015
BAR_DNMBP 1020..1211 CDD:153273
SH3_DNMBP_C1 1292..1348 CDD:212732
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1356..1384
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1426..1514
SH3_DNMBP_C2 1520..1576 CDD:213017
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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