Sequence 1: | NP_612024.4 | Gene: | RhoGEF3 / 38050 | FlyBaseID: | FBgn0264707 | Length: | 3519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005162798.1 | Gene: | spata13 / 568426 | ZFINID: | ZDB-GENE-091116-25 | Length: | 1251 | Species: | Danio rerio |
Alignment Length: | 1470 | Identity: | 322/1470 - (21%) |
---|---|---|---|
Similarity: | 514/1470 - (34%) | Gaps: | 446/1470 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 2066 SRSSSSSSYSGGESHEPLNGTGSTTVTPSAGSGSTSHRRALTAKQAEQEHRIRRSRSLQLTERSP 2130
Fly 2131 NRAHKSIVNVGA-----LVPQQRSVGVPYQQSRVPGGGVFPPTIRTSPAGAKIHVNS-----PAP 2185
Fly 2186 PN-----SSVRVRHNETDKARSFDFDYNNFSRGGGAKGSSRTAHTSGSGGDSGS----------- 2234
Fly 2235 ---------NQNLRVERESRSFDDEICEAVLNNNNGSNGSVSGLRFLQPATDSGQVSMASTSSSR 2290
Fly 2291 LRKSNSPVSASGMEAS---RSPQSSGS---------STNNLH------QQARQSGSPQSYGTRLC 2337
Fly 2338 DHELTYEMLRKSPIMNFRRGDSGDYELPVMLRNRETINSGGNSEL-----NFMSNETRIYEHPTT 2397
Fly 2398 VLKSQRSLRQSPGSRDDLNLEVAVGVGGDYIYRQPANQPRSSSVKAEFLTTATTKSCTKTLDTCD 2462
Fly 2463 YWPRCAACQHKSVSGELKKGPSASGKPLTVLDNVQPHVTSVIVN-EDNAVPGPQLRSLEKSNPSW 2526
Fly 2527 TFLCSGIASICQPV---QQTETDH-STAQEAAEEDIVIRKVKPNKSRRTGRSRSLPSVMLRRLYL 2587
Fly 2588 AGMPKPGSNEMGTTSDCAASLSQQI-------KAVSSPT---LSEPCLEEQPQKGTESTDVANTG 2642
Fly 2643 SSAGSGGLGVLQKFKRTLNNFNNKNQLHISPLSPAAVGNNAPKTKTSPTTTTASIAPMITTTTAS 2707
Fly 2708 DPGSEAGDTSSGKYRFGPLIWRSSKERRKTKY-NRRDKCNSGDSGIQIELEQDEQYSRATMAVSR 2771
Fly 2772 QDEPRAFALTNGSCGVALSKMRAIRRTNSAKASSILGPFIVKTKIAKHLNIGESDKAERK-APES 2835
Fly 2836 LPTR--------------------------SLSQPNGLESYG--MGR---------PDLEDSDSD 2863
Fly 2864 SVASNEEAISFYP-------------------TTYAEVLYNFTAGGPQELGLERGMLIEILRKEV 2909
Fly 2910 GPWWFGRIKKEETNLVEDILGPELGWFPKEFVRIIHCPETDNFFIAHRAAADEAAAE--EATARA 2972
Fly 2973 EEGSVPVPVAAFAEDTDVTVTTDQSNVTLIVIESPPTPSAPSVDFVAQPDHSTIIRRSAVRELLD 3037
Fly 3038 TEVNYVKLLAAICDGYLPAMSKRIDIFSPNSIRLIFSNITAIYKFQRKFLEALRRGIEQ-----N 3097
Fly 3098 QVAKVFLKMHKGFLCYSTYCNAYPRALIELETYDRVKDARTILENCRESQNLAELPLSAHLLAPV 3162
Fly 3163 QRICRYPLHLNEIIKSALEKGAKEGNDTDGAKSAGKTTDYEQLDVTELDIPDSQDTVNLALEAMR 3227
Fly 3228 GITEAVNEGKRHSE---TIARHQASFQNFKGPPLHLHSARFFLQVDATRQKQNLWNSSYTLFLFD 3289
Fly 3290 NQLVYCKRDIIKRSHFIYKGRIFLDRCRVVNVRDGKMFGHT----IKNSLRI-YSESRDKWYDFS 3349
Fly 3350 FRSANRKHRFLSTLALERQFGGKALYVSEMTGFEYNYEER 3389 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF3 | NP_612024.4 | DUF4802 | <754..>790 | CDD:292678 | |
SH3 | 2876..2942 | CDD:214620 | 19/84 (23%) | ||
RhoGEF | 3031..3235 | CDD:279015 | 67/208 (32%) | ||
PH_Collybistin_ASEF | 3240..3373 | CDD:269931 | 37/140 (26%) | ||
PH | <3285..3363 | CDD:278594 | 25/82 (30%) | ||
spata13 | XP_005162798.1 | SH3 | 747..800 | CDD:327375 | 19/64 (30%) |
RhoGEF | 841..1020 | CDD:214619 | 67/208 (32%) | ||
PH_Collybistin_ASEF | 1025..1163 | CDD:269931 | 38/144 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 121 | 1.000 | Domainoid score | I5634 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3519 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001415 | |
OrthoInspector | 1 | 1.000 | - | - | otm24762 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103254 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR45834 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1291 |
SonicParanoid | 1 | 1.000 | - | - | X1124 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.840 |