Sequence 1: | NP_612024.4 | Gene: | RhoGEF3 / 38050 | FlyBaseID: | FBgn0264707 | Length: | 3519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261446.1 | Gene: | sif / 43892 | FlyBaseID: | FBgn0085447 | Length: | 2734 | Species: | Drosophila melanogaster |
Alignment Length: | 2399 | Identity: | 457/2399 - (19%) |
---|---|---|---|
Similarity: | 742/2399 - (30%) | Gaps: | 919/2399 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 1616 LTDPGRRSDLARKSFILQHQQQHQSN----ISMTEPKFVGSKVEELIQRNEARLSGCSIRYPSLR 1676
Fly 1677 PGHRI-------IDPQLANILNERPGFLPVKGPTDLDSPLTPILSPPPAFQD---NSRSARRQER 1731
Fly 1732 -RNPGRQQGPLPLP--VPFRSEPQMDPQNPI-NGSAKGMVFSRSFEYDTRRHTP-TDNYVETFSR 1791
Fly 1792 SFDGNLSDR--LLNLAVLAGQRERSPNFSTLTGNSPNYLTKRESGGGSSGSLRSRDSSPKYLHPQ 1854
Fly 1855 ATTAYLNAAVKEAPPVYSVPTGSQAKYSPRSRFERTTERSKTHALGRSRKSQFSRVGSAGPLIAH 1919
Fly 1920 PNTANVGVSRFRSFDTSKS----------QRLNSCDSGARSDLSNDELDNEDGGLNDFLSAGSHK 1974
Fly 1975 FPKIGTSSVSVSPFKMQRQRSLTPDRNDSHSSTSSLRKQRSNTP--ESRSLTPEERRKK------ 2031
Fly 2032 ---------------GSQLSLGG------------ARQSSSSRSNTFEG-RQRHD---------- 2058
Fly 2059 -----------DKTPPN-----------ISRSSSSSSYSGGESHEPLNGTG-------------- 2087
Fly 2088 --------STTVTPSAGSGST-------SHRRALTAKQAEQEHRIRRSRSLQLTERSPNRAHKSI 2137
Fly 2138 VNVGALV-PQQRSVGVPYQQSRVPGGGVFPPTIRTSPAGAKIHVNSPAPPN---SSVR------- 2191
Fly 2192 -----------VRHNETDKARSFDFDYN-NFSRGGGAKGSSRTAHTSGSGGDSGSNQNLRVERES 2244
Fly 2245 RSFDDEICEAVLNNNNGSNGSVSGLRFLQPATDSGQVSMASTSSSRLRKSNSPVSASGMEASRSP 2309
Fly 2310 QSSGSSTNNLHQQA---RQSGSPQSYGTRLCDHELTYEMLRKSPIMNFRRGDSGDYELPVMLRNR 2371
Fly 2372 ETINSGGNSELNFMSNETRIYEHPTTVLKSQRSLRQSPGSRDDLNLEVAVGVGGDYIYRQPANQP 2436
Fly 2437 RSSSVKAEFLTTATTKS------------------------------CTKTLDTCDYWPRCAACQ 2471
Fly 2472 HKSVSGELKKGPSASGKPLTVLDN--VQP----------HVTSVIVNEDNAVPGPQLRSLEKSNP 2524
Fly 2525 SWTFLCSGIASICQPV-----QQTETDHSTAQE------AAEEDIVIRK--------VKPNKSRR 2570
Fly 2571 TGRSRSLP-SVMLRRL---------YLAG-----MPKPGS-------------NEMG--TTSD-- 2603
Fly 2604 ---CA--ASLSQQIKAVSSPTLSEPCLEEQPQKGTESTDVANTGSSAGSGGLGVLQKFKRTLNNF 2663
Fly 2664 NNKNQLHISPLSPAAVGNNAPKTKTSPTTTTASIAPMITTTTASDPGSEAGDTSSGKYRFGPL-- 2726
Fly 2727 IWRSSKERRKTKYN-----RRDKCNSGDSG-----------IQIELEQ---DEQYSRATMA---- 2768
Fly 2769 -VSRQDEPRAFALTNGSCGVALSKMRAIRRTNS-AKASSILGPFIVKTKIAKHLNIG--ESDKAE 2829
Fly 2830 RKAPESLPTRSLSQPNGLESYGMGRPDLEDS------DSDSVASNEEAISFYPTTYAEVLYNFTA 2888
Fly 2889 GGPQELGLERGMLIEILRKEVGPWWFGRIKKEETNLVEDILGPELGWFP-KEFVRIIHCPETDNF 2952
Fly 2953 FIAHRAAADEAAAEEATARAEEGSVPVPVAAFAEDTDVTVTTDQSNVTLIVIESPPTPSAPSVDF 3017
Fly 3018 VAQPDHSTII----------RRSAVRELLDTEVNYVKLLAAICDGYLPAMSKRIDIFSPNSIRLI 3072
Fly 3073 FSNITAIYKFQRKFLEALRRGIEQN-----------------QVAKVFLKMHKGFLCYSTYCNAY 3120
Fly 3121 PRALIELETYDRVKDARTILENCRESQNLAELPLSAHLLAPVQRICRYPLHLNEIIKSALEKGAK 3185
Fly 3186 EGNDTDGAKSAGKTTDYEQLDVTELDIPDSQDTVNLALEAMRGITEAVNEGKR-HSE-------T 3242
Fly 3243 IARHQAS----------------------FQNF-----KGPPLH-----LHSARFFLQVDATRQK 3275
Fly 3276 QNLW-----NSSYTLFLFDNQLVYCKRDIIKR--------SHFIYKGRIFLDRCRVVNVRDGKMF 3327
Fly 3328 GHTIKNSLRIYSESRDKWYDFSFRSANRKHRFLSTLALERQ---------------FGGKALYVS 3377
Fly 3378 EMT-------GFEYNYE--ERP--------GDY---------------SDQSDYD-------AQD 3403
Fly 3404 F-------ELATGVTSGESSLP---ESPAKSTSRLCETL-----PKKSQSRD------------- 3440
Fly 3441 -----------------------------------GISS--AENSQ-----------------IV 3451
Fly 3452 TTTSTGSLGRRHFGNWFRKPKSANCTPSQSPT-----HKPSFDADATLTEARVAAMELA 3505 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF3 | NP_612024.4 | DUF4802 | <754..>790 | CDD:292678 | |
SH3 | 2876..2942 | CDD:214620 | 10/66 (15%) | ||
RhoGEF | 3031..3235 | CDD:279015 | 57/220 (26%) | ||
PH_Collybistin_ASEF | 3240..3373 | CDD:269931 | 39/199 (20%) | ||
PH | <3285..3363 | CDD:278594 | 15/85 (18%) | ||
sif | NP_001261446.1 | WH1 | 35..144 | CDD:214674 | 15/62 (24%) |
PH1_Tiam1_2 | 860..985 | CDD:269937 | 21/141 (15%) | ||
PH | 873..974 | CDD:278594 | 20/117 (17%) | ||
TIAM1_RBD | 1141..1219 | CDD:176413 | 14/107 (13%) | ||
PDZ_signaling | 1221..1308 | CDD:238492 | 18/97 (19%) | ||
RhoGEF | 1456..1647 | CDD:238091 | 58/222 (26%) | ||
PH2_Tiam1_2 | 1650..1823 | CDD:269957 | 38/197 (19%) | ||
PH | 1693..1812 | CDD:278594 | 32/143 (22%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3519 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1291 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |