Sequence 1: | NP_612024.4 | Gene: | RhoGEF3 / 38050 | FlyBaseID: | FBgn0264707 | Length: | 3519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038958459.1 | Gene: | Arhgef28 / 361882 | RGDID: | 1307061 | Length: | 1714 | Species: | Rattus norvegicus |
Alignment Length: | 2099 | Identity: | 373/2099 - (17%) |
---|---|---|---|
Similarity: | 640/2099 - (30%) | Gaps: | 754/2099 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 800 AGTLPSSAQDDQVERLEAPPASMEQQQYADLKQNKY----AQDFFKHVNDVKRSIYQSEMKRNNS 860
Fly 861 LESSRSGPRAGGSTKSNV-----KASPKRAASQETRLVTTLP--LSRSRLSAGVKPTPAPRTSLQ 918
Fly 919 TPTPLPETTVAKDPTPSKRKSQPTVRREYPSLD-RLVASTT-------GTIPKKNSRNI------ 969
Fly 970 ---TAASLQSPKLTQKTRSEAPEKKVAPEDQLPLPPSGKRHHRTGASKTNTNAPCSSLRRKDIPA 1031
Fly 1032 PPPPSP------ATYSDLQELKANMEGFRDDTKSR-------SLEYDTND--------------L 1069
Fly 1070 TAD------------------DNSNKTQKKSL-SGPPNPMTEAPIGATDAGAVETDDNDVFYDAR 1115
Fly 1116 SEDSGGGILPSNTSDISKMSPSHMATFTRAATNENRKGAFDNEKEHSAEDDDSPSPAAPAPEGRE 1180
Fly 1181 QASSITGRPKGNGNSKITTTPSC----ELGS------SAEAESKLDSAALCRPRPRPRQASPHLP 1235
Fly 1236 PECTDTGGAGDEQASKTKHEKKTPADAPRQHVGPTCSEGQRTAALATNVACALSTTTNAGNTSAS 1300
Fly 1301 ----------------NSVLELELSCKTGNTDSETP---AV-AHSDPTSDVPA------------ 1333
Fly 1334 --CGTAENPT-------H-----LRALTRQDYACIDSSEAQSDDSHLTRDSITRESQNDELSSS- 1383
Fly 1384 ---------TLEKLDVSTLPLPALPKRR---RTRS-----RTSPSKHRQQQQQQQQQQQQ--RHE 1429
Fly 1430 VIEDANAVDASTAAAGQQHPKPRQGAASPESQKPEISGAKNNAAGEQQKQPQSQQQQTHLSAFQQ 1494
Fly 1495 YVAKRRESLEASNRCFNEKLEARRMHYHMGGSAANGNATASHLTAGSNGVPTYLFGENFYGVPAT 1559
Fly 1560 GRKSISPTTKKEEIFLNKS--GWVQVNTTRGVNKDDNGG---GYRSLSYAQQNGGGRVAAMLTDP 1619
Fly 1620 GRRSDLARKSFILQ-----HQQQHQSNISMTEPKFVGSKVEELIQRNEA--RLSGCSIRYPSLRP 1677
Fly 1678 GHRIIDPQLANILNE--RPGFLPVKGPTDLD-SPLTPILSPPPAFQDNSRSARR-----QERRNP 1734
Fly 1735 GRQQGPLPLPVPFRSEPQMDPQNPINGSAKGMVFSRSFEYDTRRHTPTDNYVETFSRSFDGNLSD 1799
Fly 1800 RLLNLAVLAGQRERSPNFSTLTGNS--PNYLTKRESGGGSSGSLRSRDSSPK--YLHPQATTAYL 1860
Fly 1861 NAAVKEAPPVYSVPTGSQAKYSPRSRFER----TTERSKTHALGRSRKSQFSRVGSAGPLIAHPN 1921
Fly 1922 TANVGVSRFRSFDTSKSQR----LNSCDSGARSDLSNDELDNE------------DG-------- 1962
Fly 1963 G---------LNDFLSAGSHKFPKIGTSSVSVSPFKMQRQR-------------------SLTPD 1999
Fly 2000 RNDSHSSTSSLRKQRSN-----------TPESR----SLTPEERRKKGSQLSLGGARQSSSSRSN 2049
Fly 2050 ------TFEGRQRHDDKTPPNISRSSSSSSYSGGES-H-EPLNGTGSTTVTPSAGSGSTSHRRAL 2106
Fly 2107 TAKQAEQEHRIRRSRSLQLTERSPNRAHKSIVNVGALVPQQRSVGVPYQQSRVPGGGVFPPTIRT 2171
Fly 2172 SPAGAKIHVNSPAPPNSSVRVRHNETDKARSFDFDYNNFSRGGGAKGSSRTAHTSGSGGD----- 2231
Fly 2232 -------------SGSNQNLRVERESRSFDDEICEAVLNNNNGSNGSVSGLRF-LQPA---TDS- 2278
Fly 2279 ---------GQVSMASTSSSRLRKSNSPVSASGMEASRSPQSSGSSTNNLHQQARQSGSPQSYGT 2334
Fly 2335 RLCDHELTYEMLRKSPIMNFRRGDSGDYELPVMLRNRETINSGGNSELN-----FMSNETRIYEH 2394
Fly 2395 PTTVLKSQRSLRQ--------------------SPGSRD--DLNLEVAVGVGGDYIYRQPANQPR 2437
Fly 2438 SSSV---KAEFLTTATTKSCTKTLDTCDYWPRCAACQHKSVSGELKKGPSASGKPLTV------- 2492
Fly 2493 LDNVQPHVTSVIVNEDNAVP------------GPQLRSLEKSNPSWTFLCSGIASICQPVQQTET 2545
Fly 2546 DHSTAQEAAEEDIVIRKVK 2564 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF3 | NP_612024.4 | DUF4802 | <754..>790 | CDD:292678 | |
SH3 | 2876..2942 | CDD:214620 | |||
RhoGEF | 3031..3235 | CDD:279015 | |||
PH_Collybistin_ASEF | 3240..3373 | CDD:269931 | |||
PH | <3285..3363 | CDD:278594 | |||
Arhgef28 | XP_038958459.1 | C1_p190RhoGEF | 659..719 | CDD:410426 | 11/91 (12%) |
RhoGEF | 866..1055 | CDD:214619 | 50/278 (18%) | ||
PH_p190RhoGEF | 1100..1200 | CDD:275430 | 17/102 (17%) | ||
DUF5401 | <1368..>1536 | CDD:375164 | 43/191 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3519 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |