Sequence 1: | NP_612024.4 | Gene: | RhoGEF3 / 38050 | FlyBaseID: | FBgn0264707 | Length: | 3519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006495504.1 | Gene: | Prex2 / 109294 | MGIID: | 1923385 | Length: | 1617 | Species: | Mus musculus |
Alignment Length: | 383 | Identity: | 97/383 - (25%) |
---|---|---|---|
Similarity: | 175/383 - (45%) | Gaps: | 75/383 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 3022 DHSTIIRRSAVRELLDTEVNYVKLLAAICDGYLPAMSK----RID-IFSPNSIRLIFSNITAIYK 3081
Fly 3082 FQRKFLEALRRGI-----EQNQVAKVFLKMHKGFLCYSTYCNAYPRA---LIELETYDRVKDART 3138
Fly 3139 ILENCR--ESQNLAELPLSAHLLAPVQRICRYPLHLNEIIKSALEKGAKEGNDTDGAKSAGKTTD 3201
Fly 3202 YEQLDVTELDIPDSQDTVNLALEAMRGITEAVNEGKRHS---ETIARHQASFQNFKGPPL----- 3258
Fly 3259 HLHSARFFLQVDATRQKQNLWNSSYTLFLFDNQLVYCKRD--IIKRS-------HFIYKGRIFLD 3314
Fly 3315 RCRVVNVRDG----KMFGHTIKNSLRIYSESRDKWYDFSFRSANRKHRFLSTLALERQ 3368 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF3 | NP_612024.4 | DUF4802 | <754..>790 | CDD:292678 | |
SH3 | 2876..2942 | CDD:214620 | |||
RhoGEF | 3031..3235 | CDD:279015 | 55/218 (25%) | ||
PH_Collybistin_ASEF | 3240..3373 | CDD:269931 | 36/150 (24%) | ||
PH | <3285..3363 | CDD:278594 | 30/90 (33%) | ||
Prex2 | XP_006495504.1 | RhoGEF | 19..204 | CDD:366202 | 55/217 (25%) |
PH_Collybistin_ASEF | 210..356 | CDD:269931 | 36/150 (24%) | ||
DEP_1_P-Rex | 374..454 | CDD:239886 | |||
DEP_2_P-Rex | 466..558 | CDD:239887 | |||
PDZ_signaling | 587..662 | CDD:238492 | |||
PDZ_signaling | 669..736 | CDD:238492 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3519 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm43009 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |