Sequence 1: | NP_612024.4 | Gene: | RhoGEF3 / 38050 | FlyBaseID: | FBgn0264707 | Length: | 3519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031759716.1 | Gene: | prex2 / 100490424 | XenbaseID: | XB-GENE-6048678 | Length: | 1603 | Species: | Xenopus tropicalis |
Alignment Length: | 377 | Identity: | 97/377 - (25%) |
---|---|---|---|
Similarity: | 174/377 - (46%) | Gaps: | 73/377 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 3027 IRRSAVRELLDTEVNYVKLLAAICDGYLPAMSKRIDI-----FSPNSIRLIFSNITAIYKFQRKF 3086
Fly 3087 LEALRRGI--EQN---QVAKVFLKMHKGFLCYSTYCNAYPRALIELETYDRVKDARTILENCR-- 3144
Fly 3145 ESQNLAELPLSAHLLAPVQRICRYPLHLNEIIKSALEKGAKEGNDTDGAKSAGKTTDYEQLDVTE 3209
Fly 3210 LDIPDSQDTVNLALEAMRGITEAVNEGKRHS---ETIARHQASFQNFKGPPLH-------LHSAR 3264
Fly 3265 FFLQVDATRQKQNLWNSSYTLFLFDNQLVYCKRD--IIKRS-------HFIYKGRIFLDRCRVVN 3320
Fly 3321 VRDG----KMFGHTIKNSLRIYSESRDKWYDFSFRSANRKHRFLSTLALERQ 3368 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF3 | NP_612024.4 | DUF4802 | <754..>790 | CDD:292678 | |
SH3 | 2876..2942 | CDD:214620 | |||
RhoGEF | 3031..3235 | CDD:279015 | 56/215 (26%) | ||
PH_Collybistin_ASEF | 3240..3373 | CDD:269931 | 36/152 (24%) | ||
PH | <3285..3363 | CDD:278594 | 29/90 (32%) | ||
prex2 | XP_031759716.1 | RhoGEF | 24..209 | CDD:395496 | 56/214 (26%) |
PH_Collybistin_ASEF | 215..362 | CDD:269931 | 36/152 (24%) | ||
DEP | 379..459 | CDD:413322 | |||
DEP_2_P-Rex | 471..563 | CDD:239887 | |||
PDZ | 672..740 | CDD:214570 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm48133 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |