Sequence 1: | NP_612024.4 | Gene: | RhoGEF3 / 38050 | FlyBaseID: | FBgn0264707 | Length: | 3519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_004917856.1 | Gene: | arhgef4 / 100487089 | XenbaseID: | XB-GENE-960463 | Length: | 1808 | Species: | Xenopus tropicalis |
Alignment Length: | 2213 | Identity: | 470/2213 - (21%) |
---|---|---|---|
Similarity: | 765/2213 - (34%) | Gaps: | 674/2213 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 1311 KTGNTDSETPAVAHSDPTSDVPACGTAENPTHLRALTRQDYACIDSSE----AQSDDSHLTRDSI 1371
Fly 1372 TRESQNDELSSSTLEKLDVSTLPLPALPKRRRTRSRTSPSKHRQQQQQQQQQQQQRHEVIEDANA 1436
Fly 1437 VDASTAAAGQQHPKPRQGAASPESQKPEISGAKNNAAGEQQKQPQSQQQQTHLSAFQQYVAKRRE 1501
Fly 1502 SLEASNRCFNEKLEARRMHYHMGGSAANG------NATASHLTAG----SNGVPTYLFGENFYGV 1556
Fly 1557 PATGRKSISP--TTKKEEIFLNKSGWVQVNTTRGVNKDDNGGGYRSLSYAQQNGGGRVAAMLTDP 1619
Fly 1620 GRRSDLARKSFILQHQQQHQSNISMTEPKFVGSKVEELIQRNEARLSG--CSIRYPSLRPGHRII 1682
Fly 1683 DPQLANILNER---PGFLPVKGPTDLDSPLTPILSPPPAFQDNSRSARRQERRNPGRQQGPLPLP 1744
Fly 1745 VPFRSEPQMDPQNPINGSAKGMVFSRSFEYDTRRHTPTDNYVETFSRSFD--GNLSDRLLNLAVL 1807
Fly 1808 AGQRERSPNFSTLTGNSPNYLTKRESGGGS--------SGSLRSRDSSPKYLHPQATTAYLNAAV 1864
Fly 1865 KEAPPVYSVPTGSQA-KYSPRSRFERTTE----RSKTHALGRS------RKSQFSRVGSAGPLIA 1918
Fly 1919 HPNTANVGVSRFRSFDTSKSQRLNSCDSGARSDLSNDELDNEDGGLNDFLSAGSHKFPKIGTSSV 1983
Fly 1984 SVSPFKMQRQRSLTPDRNDSHSSTSSLRKQRSNTPESRS---LTPEERRKKGSQLSLGGARQSSS 2045
Fly 2046 SRSNTFEGRQRHDDKTPPNISRSSSSSSYSGGESHEPLNGTGSTTVTPSAGSGSTSHRRALTAKQ 2110
Fly 2111 AEQEHRIRRSRSLQLTERSPNRAHKSIVNVGALVPQQRSVGVPYQQSRVPGGG--VFPPTIRTSP 2173
Fly 2174 AGAKIHVNSPAPPNSSVRVRHNETDKARSFDFDYNNFSRGGGAKGSSRTAHTSGSGGDSGSNQNL 2238
Fly 2239 RVERESRSFDDEICEAVLNNNN--GSNGSVSGLRFLQPATDSGQV-SMASTSSSRLRKSNSPVSA 2300
Fly 2301 SGMEASRSPQSSGSSTNNLHQQARQS--GSPQSYGTRLCDHELTYEMLRKSPIMNFRRGDSGDYE 2363
Fly 2364 -LPVMLRNRETINSG---GNSELNFMSNETRIYEHPTTVLKSQRSLRQSPGSRDDLNLEVAVGVG 2424
Fly 2425 GDYIYRQPANQPRSSSVKAEFLTTATTKSCTKTLDTCDYWPRCAACQHKSVSGELKKGPSASGKP 2489
Fly 2490 LTVLD----------------NVQPHVTSVI----VNEDNAVPGPQLRSLEKSNPSWTFLCSGIA 2534
Fly 2535 SICQPVQQTETDHSTAQEAAEEDIVIRKVKPNKSRRTGRSRSLPSVMLRRLYLAGMPKPGSNEMG 2599
Fly 2600 TTSDCAASLSQQIKAVSSPTLSEPCLEEQPQKGTESTDVANTGSSAGSGGLGVLQKFKRTLNNFN 2664
Fly 2665 NKNQLHISPLSPAAVGNNAPKTKTSPTTTTASIAPMITTTT--------ASDPGSEAGDTSSGKY 2721
Fly 2722 RFGPL------IWRSSKERRKTKYNRRDKCNSGDSGIQIELEQDEQYSRATMAVSRQDEPRAFAL 2780
Fly 2781 TNGSCGVALSKMRAIRRTNSAKASSILGPFIVKTKIAKHLNIGESDKAERKAPESLPTRSLSQPN 2845
Fly 2846 GLESYG--------------MGRPDLED---SDSD-----------------SVASNEEAISFYP 2876
Fly 2877 TTYAEVLYNFTAGGPQELGLERGMLIEILRKEVGPWWFGRIKKEETNLVEDILGPELGWFPKEFV 2941
Fly 2942 RIIHCPETDNFFIAHRAAADEAAAEEATARAEEGSVPVPVAAFAEDTDVTVTTDQSNVTLIVIES 3006
Fly 3007 PPTPSAPSVDFVAQPDHSTIIRRSAVRELLDTEVNYVKLLAAICDGYLPAMSKRIDIFSPNSIRL 3071
Fly 3072 IFSNITAIYKFQRKFLEALRRGIEQ-----NQVAKVFLKMHKGFLCYSTYCNAYPRALIELETYD 3131
Fly 3132 RVKDARTILENCRESQNLAELPLSAHLLAPVQRICRYPLHLNEIIKSALEKGAKEGNDTDGAKSA 3196
Fly 3197 GKTTDYEQLDVTELDIPDSQDTVNLALEAMRGITEAVNEGKRHSET---IARHQASFQNFKGPPL 3258
Fly 3259 HLHSARFFLQVDAT-------RQKQNLWNSSYTLFLFDNQLVYCKRDIIKRSHFIYKGRIFLDRC 3316
Fly 3317 RVVNVRDG--KMFGHTIKNSLRIYSESRDKWYDFSFRSANRKHRFLSTLALERQFGGKALYVSEM 3379
Fly 3380 TGF 3382 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF3 | NP_612024.4 | DUF4802 | <754..>790 | CDD:292678 | |
SH3 | 2876..2942 | CDD:214620 | 21/65 (32%) | ||
RhoGEF | 3031..3235 | CDD:279015 | 69/208 (33%) | ||
PH_Collybistin_ASEF | 3240..3373 | CDD:269931 | 40/144 (28%) | ||
PH | <3285..3363 | CDD:278594 | 29/79 (37%) | ||
arhgef4 | XP_004917856.1 | SH3_ASEF | 1291..1363 | CDD:212906 | 28/97 (29%) |
RhoGEF | 1404..1583 | CDD:279015 | 69/208 (33%) | ||
PH_Collybistin_ASEF | 1588..1727 | CDD:269931 | 41/148 (28%) | ||
PH | 1616..1719 | CDD:278594 | 31/108 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 122 | 1.000 | Domainoid score | I5575 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001415 | |
OrthoInspector | 1 | 1.000 | - | - | otm48133 | |
Panther | 1 | 1.100 | - | - | O | PTHR45834 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1124 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 6.010 |