Sequence 1: | NP_612024.4 | Gene: | RhoGEF3 / 38050 | FlyBaseID: | FBgn0264707 | Length: | 3519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_031753117.1 | Gene: | spata13 / 100485539 | XenbaseID: | XB-GENE-991808 | Length: | 1254 | Species: | Xenopus tropicalis |
Alignment Length: | 1564 | Identity: | 363/1564 - (23%) |
---|---|---|---|
Similarity: | 555/1564 - (35%) | Gaps: | 497/1564 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 1924 NVGVSRFRSFDTSKSQRL-NSCDSGARSDLSNDEL--DNEDGGLNDFLSAGSHKFPKIGTSSVSV 1985
Fly 1986 SPFKMQRQRSLTPDRNDS-HSSTSSLRKQRSNTPESRSLTPEERRKKGSQLSLGGARQSSSSRSN 2049
Fly 2050 TFEGRQRHDDKTPPNISRSSSSSSYSGGES-HEPLNGTGS-TTVTPSAGSGSTSHRRALTAKQAE 2112
Fly 2113 QEHRIRRSRSLQLTERSPNRAHKSIVNVGALVPQQRSVGVPYQQSRVPGGGVFPPTIRTSPAGAK 2177
Fly 2178 IHVNSPAPPNSSVRVRHNETD------------KARSFDFDYNNFSRGGGAKGSSRTAHTSGSGG 2230
Fly 2231 DSGSNQNLRVERESRSFDDEICEAVLNNNNGSNGSVSGLRFLQPATDSGQVSMASTSSSRLRKSN 2295
Fly 2296 SPVSASGM-----------------EASR----SPQSSGSSTNN--LHQQARQSGSPQSYGTRLC 2337
Fly 2338 DHELTYEMLRKSPIMNFRRGDSGDYELP-VMLRNRETINSGGNSELNFMSNETRIYEHPTTVLKS 2401
Fly 2402 QRSLRQSPGSRDDLNLEVAVGVGGDYIYRQPANQPRSSSVKAEFLTTATTKSCTKTLDTCDYWPR 2466
Fly 2467 CAACQHKSVSGELKK--GPSASGKPLTVLDNVQPHVTSVIVNEDNAVPGPQLRSLEKSNPSWTFL 2529
Fly 2530 CSGIASICQPVQQTETDHST-AQEAAEEDIVIRKVKPNKSRRTGRSRSLPSVMLRRLYLAGMPKP 2593
Fly 2594 -----GSNEMGTTSDCAASLS-----QQIKAVSSPTLSEPCLEEQPQKGTESTDVANTGSSAGSG 2648
Fly 2649 GLGVLQKFKRTLNNFNNKNQLHISPLSPAAVGNNAPKTKTSPTTTTASIAPMITTTTASDPGSEA 2713
Fly 2714 GDTSSGKYRFGPLIWRSSKERR----KTKYNRRDKCNSGDSGIQI--ELEQDEQYSRATMAVSRQ 2772
Fly 2773 DEP--------------RAFALTNGSCGVALSKMRAIRRTNSAKASSILGPFIVKTKIAKHLNIG 2823
Fly 2824 ESDKAERKAPESLPTRSLSQPNGLE---SYG---MGRPDLEDSDSDSVASNEEAISFYPTTYAEV 2882
Fly 2883 LYNFTAGGPQELGLERGMLIEILRKEVGPWWFGRIKKEETNLVEDILGPELGWFPKEFVRIIHCP 2947
Fly 2948 ETDNFFIAHRAAADEAAAEEATARAEEGSVPVPVAAF-AEDTDVTVTTDQSNVTLIVIESPPTPS 3011
Fly 3012 APSVDFVAQPDHSTIIRRSAVRELLDTEVNYVKLLAAICDGYLPAMSKRIDIFSPNSIRLIFSNI 3076
Fly 3077 TAIYKFQRKFLEALRRGIEQ-----NQVAKVFLKMHKGFLCYSTYCNAYPRALIELETYDRVKDA 3136
Fly 3137 RTILENCRESQNLAELPLSAHLLAPVQRICRYPLHLNEIIKSALEKGAKEGNDTDGAKSAGKTTD 3201
Fly 3202 YEQLDVTELDIPDSQDTVNLALEAMRGITEAVNEGKRHSET---IARHQASFQNFKGPPL----- 3258
Fly 3259 -HLHSARFFLQVDATRQKQNLWNSSYTLFLFDNQLVYCKRDIIKRSHFIYKGRIFLDRCRVVNVR 3322
Fly 3323 DGK--MFGHTIKNSLRIYSESRDKWYDFSFRSANRKHRFLSTLALERQFGGKALYVSEMTGFEYN 3385
Fly 3386 YEER 3389 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF3 | NP_612024.4 | DUF4802 | <754..>790 | CDD:292678 | |
SH3 | 2876..2942 | CDD:214620 | 20/65 (31%) | ||
RhoGEF | 3031..3235 | CDD:279015 | 64/208 (31%) | ||
PH_Collybistin_ASEF | 3240..3373 | CDD:269931 | 42/143 (29%) | ||
PH | <3285..3363 | CDD:278594 | 29/79 (37%) | ||
spata13 | XP_031753117.1 | PTZ00449 | <422..717 | CDD:185628 | 89/406 (22%) |
SH3_ASEF | 734..805 | CDD:212906 | 27/110 (25%) | ||
RhoGEF | 844..1023 | CDD:214619 | 64/208 (31%) | ||
PH_Collybistin_ASEF | 1028..1166 | CDD:269931 | 43/147 (29%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 122 | 1.000 | Domainoid score | I5575 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001415 | |
OrthoInspector | 1 | 1.000 | - | - | otm48133 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR45834 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1124 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 5.100 |