Sequence 1: | NP_612024.4 | Gene: | RhoGEF3 / 38050 | FlyBaseID: | FBgn0264707 | Length: | 3519 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_001921555.3 | Gene: | dnmbp / 100005174 | ZFINID: | ZDB-GENE-101026-2 | Length: | 1673 | Species: | Danio rerio |
Alignment Length: | 1307 | Identity: | 259/1307 - (19%) |
---|---|---|---|
Similarity: | 441/1307 - (33%) | Gaps: | 419/1307 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 2257 NNNNGSNG--SVSGLRFLQPATDSGQVSMASTSSSRLRKSNSPVSASGMEASRSPQSSGSSTNNL 2319
Fly 2320 HQQARQSGSPQSYGTRLCDHELTYEMLRKSPIMNFRRGD-------------SGDYELPVMLRNR 2371
Fly 2372 ETINSGGNSELNFMSNETRIYEHPTTV-----LKSQRSLRQSPGSRDDLNLEVAV---------- 2421
Fly 2422 --GVGGDYIYRQPANQPRSSSVKAEFLTTATTKSCTKTLDTCDYW------PRCAACQHK--SVS 2476
Fly 2477 GELKKGPSASGKPLTVLDNVQ----------PHVTSVIVNEDNAVP--GPQLRSLEKSNPSWTFL 2529
Fly 2530 CSGIASICQPVQQTETDHSTAQEAAEEDIVIRKVKPNKSRRTGRSRSLPSVMLRRLYLAGMPKPG 2594
Fly 2595 SNEMGTTSDCAASLSQQIKAVSSPTLSEPCLEEQPQKGTESTDVANTGSSAGSGGLGVLQKFKRT 2659
Fly 2660 LNNFNNKNQLHISPLSPAAVGNNA-PKTKTSPTTTTASIAPMITTTTASDPGSEAGDTSSGKYRF 2723
Fly 2724 ----GPLIWRSSKER-RKTKYNRRDKCNSGD--SGIQIELEQDEQ----------YSRATMAVSR 2771
Fly 2772 QDEPRAFA--LTNGSCGVALSKMRAIRRTNSAKASSILGPFIVKTKIAKHLNI----GESD---- 2826
Fly 2827 ----KAERKAPES------------------------------LPTRS-LSQPNGLESYGMGRPD 2856
Fly 2857 LEDSDSDSVASNEEAISFYPTTYAEVLYNFTAGGPQELGLERGMLIEILRKEVGPWWFGRIKKEE 2921
Fly 2922 TNLVEDILGPELGWFPKEFVR-------IIHCPETDNFFIAHRAAADEAAA-----EEATARAEE 2974
Fly 2975 GSVPVPVAAFAEDTDVTVTTDQ---SNVTLIV-----IESPPTPSAPSVDFVAQPDHSTIIRRS- 3030
Fly 3031 AVRELLDTEVNYVKLLAAICDGYLPAMSKR----IDIFSPNSIRLIFSNITAIYKFQRKFLEALR 3091
Fly 3092 RGIEQNQVAKVFLKMHKGFL--CYSTYCNAYPRALIELETYDRVKDARTILENC--------RES 3146
Fly 3147 QNLAELPLSAHLLAPVQRICRYPLHLNEIIKSALEKGAKEGNDTDGAKSAGKTTDYEQLDVTELD 3211
Fly 3212 IPDSQDTVNLALEAMRGITEAVNEGKRHSETIARHQASFQNFKGPPLHLHSARFFLQVDATRQKQ 3276
Fly 3277 NLWNSSYTLFLFDNQLVYCKRDIIKRSHFIYKGRIFLDRCRVVNVRDGKMFGHTIKNSLRIYSES 3341
Fly 3342 RDKWYDFS---FRSANRKHR-FLSTLALERQFGGKALYVSEMTGFEY--NYEERPGDYSDQSDYD 3400
Fly 3401 AQDFELA 3407 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF3 | NP_612024.4 | DUF4802 | <754..>790 | CDD:292678 | |
SH3 | 2876..2942 | CDD:214620 | 15/65 (23%) | ||
RhoGEF | 3031..3235 | CDD:279015 | 48/217 (22%) | ||
PH_Collybistin_ASEF | 3240..3373 | CDD:269931 | 21/136 (15%) | ||
PH | <3285..3363 | CDD:278594 | 15/81 (19%) | ||
dnmbp | XP_001921555.3 | SH3_DNMBP_N1 | 6..56 | CDD:212728 | |
SH3 | 70..123 | CDD:354299 | 6/15 (40%) | ||
SH3_DNMBP_N3 | 152..202 | CDD:212730 | 16/80 (20%) | ||
SH3 | 263..312 | CDD:354299 | 10/55 (18%) | ||
RhoGEF | 854..1031 | CDD:306973 | 48/216 (22%) | ||
BAR_DNMBP | 1083..1275 | CDD:153273 | 16/74 (22%) | ||
SH3_DNMBP_C1 | 1356..1412 | CDD:212732 | |||
SH3_DNMBP_C2 | 1613..1669 | CDD:213017 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3519 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |