DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm2 and CTDP1

DIOPT Version :9

Sequence 1:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_004706.3 Gene:CTDP1 / 9150 HGNCID:2498 Length:961 Species:Homo sapiens


Alignment Length:391 Identity:77/391 - (19%)
Similarity:123/391 - (31%) Gaps:132/391 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RSLTSGLRRALVKQPRKGGDVGKPGMELGR---CS--------CFGLRVNLSNASVVYVGHRRYS 78
            ||..:|:.|.|..||   |.|..||..|.|   ||        |.....:|:.   :...:.:..
Human    84 RSERAGVVRELCAQP---GQVVAPGAVLVRLEGCSHPVVMKGLCAECGQDLTQ---LQSKNGKQQ 142

  Fly    79 TYEKTSTQILTKLFPQTSEESNDEESRERRKLEEEEEQKELERAFRRMKLGFGLFGIGSMLFSFW 143
            ....|:|..:....|:....|...|...|      |:|:.|.|. |::.|               
Human   143 VPLSTATVSMVHSVPELMVSSEQAEQLGR------EDQQRLHRN-RKLVL--------------- 185

  Fly   144 AIYFYGRPSLDE---HGNEVIDEFSCLPQMQQLMWRTWKSVNRFQRFFKEPSRKKLLPDPLQPPY 205
                  ...||:   |..|           |.....:.|.:..||....||              
Human   186 ------MVDLDQTLIHTTE-----------QHCQQMSNKGIFHFQLGRGEP-------------- 219

  Fly   206 VQPPYTLVLEIKDVLVHPDWTYETGWRFKKRPGVDVFLKECAKYFEIVVYTAEQGVTVFPLVDAL 270
                          ::|.          :.||....||::.||.:|:.|:|....:....:...|
Human   220 --------------MLHT----------RLRPHCKDFLEKIAKLYELHVFTFGSRLYAHTIAGFL 260

  Fly   271 DPNGCIM-YRLVRDSTHFDGGHHVKNLDNLNRDLKRVVVVDWDRNST-KFHPSNSFSIPRWSGND 333
            ||...:. :|::......|......||.||......:|.:..||... ||.|:            
Human   261 DPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVWKFAPN------------ 313

  Fly   334 NDTTLFELTSFLSVLGTSEIDDVREVLQYYNQFSDSLSQFRENQ-RKLGELMHAEEVEKTSKSRP 397
                |..:..::...||.::              ::....||:| ||  ::.|:...|.:..|.|
Human   314 ----LITVKKYVYFQGTGDM--------------NAPPGSRESQTRK--KVNHSRGTEVSEPSPP 358

  Fly   398 V 398
            |
Human   359 V 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm2NP_612023.1 CPDc 208..336 CDD:214729 25/129 (19%)
CTDP1NP_004706.3 Biotinyl_lipoyl_domains 21..111 CDD:299706 12/29 (41%)
FCP1_euk 177..323 CDD:131304 40/232 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 328..589 10/48 (21%)
BRCT 636..716 CDD:237994
FCP1_C 716..961 CDD:286402
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 730..752
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 780..949
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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