DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ttm2 and NEM1

DIOPT Version :10

Sequence 1:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_011867.1 Gene:NEM1 / 856393 SGDID:S000001046 Length:446 Species:Saccharomyces cerevisiae


Alignment Length:219 Identity:51/219 - (23%)
Similarity:86/219 - (39%) Gaps:50/219 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 KSVNRFQRFFKEPSRKKLLPDPLQPPYV---QPPYTLVLEIKDVLVHP---DWTY---------- 227
            |.:.||           |.|..|.|..|   |....||:::.:.|:|.   ..|:          
Yeast   229 KRMGRF-----------LFPKKLIPKSVLNTQKKKKLVIDLDETLIHSASRSTTHSNSSQGHLVE 282

  Fly   228 --------ETGWRFKKRPGVDVFLKECAKYFEIVVYTAEQGVTVFPLVDALDPN--GCIMYRLVR 282
                    .|.:...|||..|:||.:.:|:::::::||.......|::|.|:.:  .....|..|
Yeast   283 VKFGLSGIRTLYFIHKRPYCDLFLTKVSKWYDLIIFTASMKEYADPVIDWLESSFPSSFSKRYYR 347

  Fly   283 -DSTHFDGGHHVKNLD----------NLNRDLKRVVVVDWDRNSTKFHPSNSFSIPRWSGNDNDT 336
             |....||..::|:|.          ..:..|..|:::|....|...:..|:..:..|..:..||
Yeast   348 SDCVLRDGVGYIKDLSIVKDSEENGKGSSSSLDDVIIIDNSPVSYAMNVDNAIQVEGWISDPTDT 412

  Fly   337 TLFELTSFLSVLGTSEIDDVREVL 360
            .|..|..||..:..|  .|||.:|
Yeast   413 DLLNLLPFLEAMRYS--TDVRNIL 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm2NP_612023.1 CPDc 208..336 CDD:214729 31/161 (19%)
PRK00771 <349..384 CDD:179118 5/12 (42%)
NEM1NP_011867.1 NIF 252..431 CDD:397254 39/180 (22%)

Return to query results.
Submit another query.