DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm2 and PSR2

DIOPT Version :9

Sequence 1:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_013119.1 Gene:PSR2 / 850706 SGDID:S000004009 Length:397 Species:Saccharomyces cerevisiae


Alignment Length:359 Identity:89/359 - (24%)
Similarity:147/359 - (40%) Gaps:63/359 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 LVKQPRKGGDVGKPGMELGRCSCFGLRVNLS--NASVVYVGHRRYSTYEKTSTQILTKLFPQTSE 97
            |:.....|.:.|...|:....|..|....||  :::..|...:.|..|.:...: :|::.....|
Yeast    65 LLSSSDSGSNAGSKTMQENGNSGNGKLAPLSRDHSNNSYDEEKEYEDYNEGDVE-MTEVNNAGEE 128

  Fly    98 ESNDEESRERR---------------KLEEEEEQKELERAFRRMKLGFGLFGIGSMLFSFWAIYF 147
            |..|:|::|::               .:.:|...::            ||:.:|....:  ..|.
Yeast   129 EEEDDEAKEKQDHVVHEYNVDADRNSSINDEAPPQQ------------GLYQVGQEDMN--PQYV 179

  Fly   148 YGRPSLDEHGNEVIDE-FSCLPQMQQLMWRTWKSVNRFQRFFKEPSRKKLLPDPLQPPYVQPPYT 211
            ...|..|.:.....:| ||.|..:|...:..             |....|||..||.  .|....
Yeast   180 ASSPDNDLNLIPTTEEDFSDLTHLQPDQYHA-------------PGYDTLLPPKLQE--FQQKKC 229

  Fly   212 LVLEIKDVLVHPDWTYETGWRFK---------------KRPGVDVFLKECAKYFEIVVYTAEQGV 261
            |:|::.:.|||..:.|.....|.               ||||||.||...::.:|:||:||....
Yeast   230 LILDLDETLVHSSFKYMHSADFVLPVEIDDQVHNVYVIKRPGVDEFLNRVSQLYEVVVFTASVSR 294

  Fly   262 TVFPLVDALDPNGCIMYRLVRDSTHFDGGHHVKNLDNLNRDLKRVVVVDWDRNSTKFHPSNSFSI 326
            ...||:|.|||||.|.:||.|::.:...|:::|||..:.|.|...:::|....|..|||.::..|
Yeast   295 YANPLLDTLDPNGTIHHRLFREACYNYEGNYIKNLSQIGRPLSETIILDNSPASYIFHPQHAVPI 359

  Fly   327 PRWSGNDNDTTLFELTSFLSVLGTSEIDDVREVL 360
            ..|..:.:|..|.::...|..|.:..:.||..||
Yeast   360 SSWFSDTHDNELLDIIPLLEDLSSGNVLDVGSVL 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm2NP_612023.1 CPDc 208..336 CDD:214729 45/142 (32%)
PSR2NP_013119.1 FCP1 5..397 CDD:227517 89/359 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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