DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm2 and AT3G17550

DIOPT Version :10

Sequence 1:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_188382.1 Gene:AT3G17550 / 821021 AraportID:AT3G17550 Length:296 Species:Arabidopsis thaliana


Alignment Length:257 Identity:62/257 - (24%)
Similarity:90/257 - (35%) Gaps:72/257 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 HGNEVIDEFSCLPQMQQLMWRTWKSVNRFQRFFKEPSRKKLLPDPLQPPYVQPPYTLVLEIKDVL 220
            ||.    .|..|.|..||.........||...|...:.|||              .|||::...|
plant    50 HGR----AFDYLVQGLQLSHEAAAFTKRFTTQFYCLNEKKL--------------NLVLDLDHTL 96

  Fly   221 VHPD------------------------WTYETGWRFKKRPGVDVFLKECAKYFEIVVYTAEQGV 261
            :|..                        |..::.:..|.||.|..||||..:.|.:.|||....|
plant    97 LHSIRVSLLSETEKCLIEEACSTTREDLWKLDSDYLTKLRPFVHEFLKEANELFTMYVYTMGTRV 161

  Fly   262 TVFPLVDALDPNGCIMYRLVRDSTHFDGGHHVKNLDNLNRDLKRVVVVD-----WDRNST----- 316
            ....|:..:||..  :|...|..|. |...:||.||.:..:.:.||:||     |..:.:     
plant   162 YAESLLKLIDPKR--IYFGDRVITR-DESPYVKTLDLVLAEERGVVIVDDTSDVWTHHKSNLVEI 223

  Fly   317 -KFH--------PSNSFSIPRWSGNDNDTTLFELT--------SFLSVLGTSEIDDVREVLQ 361
             ::|        .|||::..:...:.|:..|..:.        .|..|....|..|||.:||
plant   224 NEYHFFRVNGPEESNSYTEEKRDESKNNGGLANVLKLLKEVHYGFFRVKEELESQDVRFLLQ 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm2NP_612023.1 CPDc 208..336 CDD:214729 40/170 (24%)
PRK00771 <349..384 CDD:179118 6/13 (46%)
AT3G17550NP_188382.1 FCP1_euk 80..229 CDD:131304 39/165 (24%)

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