DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm2 and ctdsplb

DIOPT Version :10

Sequence 1:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster
Sequence 2:XP_005163418.1 Gene:ctdsplb / 767676 ZFINID:ZDB-GENE-060929-488 Length:277 Species:Danio rerio


Alignment Length:307 Identity:79/307 - (25%)
Similarity:126/307 - (41%) Gaps:66/307 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 STQILTKLFPQTSEESNDEESRERRKLEEEEEQKELERAFRRMKLGFGLFGIGSMLFSFWAIYFY 148
            :|.|:|:: ....||.....:.|:..|.....:|:..|:            |.|.||.....|..
Zfish     3 NTSIITQV-TNPKEEEILSTNAEKVSLSNSSLKKKRTRS------------IFSSLFCCLRSYDA 54

  Fly   149 GRPSLDEHGNE----VIDEFSCLPQMQQLMWRTWKSVNRFQRFFKEPSRKKLLPDPLQPP--YVQ 207
            ..|:...:.:.    .::|....|:..|:                     :::|.| .||  |:.
Zfish    55 DTPATPNNNSSPLPPPVEENGGPPKCDQV---------------------EVIPVP-SPPEKYLL 97

  Fly   208 PPYTL--------VLEIKDVLVHPDWTYETGWRF---------------KKRPGVDVFLKECAKY 249
            |...:        |:::.:.|||..:...:...|               .|||.||.||::..:.
Zfish    98 PEVNINDYGKKCVVIDLDETLVHSSFKPISNADFIVPVEIDGTVHQVYVLKRPHVDEFLQKMGEL 162

  Fly   250 FEIVVYTAEQGVTVFPLVDALDPNGCIMYRLVRDSTHFDGGHHVKNLDNLNRDLKRVVVVDWDRN 314
            ||.|::||.......|:.|.||..|....||.|:|..|..|::||:|..|.|:|:.|::||....
Zfish   163 FECVLFTASLAKYADPVADLLDQWGVFRARLFRESCVFHRGNYVKDLSRLGRELRNVIIVDNSPA 227

  Fly   315 STKFHPSNSFSIPRWSGNDNDTTLFELTSFLSVLGTSEIDDVREVLQ 361
            |..|||.|:..:..|..:..||.|.:|..|..  |.|:.:||..|||
Zfish   228 SYIFHPENAVPVQSWFDDMTDTELLDLLPFFE--GLSKEEDVYGVLQ 272

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm2NP_612023.1 CPDc 208..336 CDD:214729 44/150 (29%)
PRK00771 <349..384 CDD:179118 7/13 (54%)
ctdsplbXP_005163418.1 HIF-SF_euk 107..266 CDD:274055 50/160 (31%)

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