DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm2 and ctdspla

DIOPT Version :10

Sequence 1:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster
Sequence 2:XP_068073219.1 Gene:ctdspla / 751737 ZFINID:ZDB-GENE-060825-333 Length:303 Species:Danio rerio


Alignment Length:285 Identity:72/285 - (25%)
Similarity:105/285 - (36%) Gaps:93/285 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 SLDEHGN-EVIDEFSCLPQMQQLMWRTWKSVNRFQRFFKEP----SRKKLLPDPLQ--------- 202
            ||.:|.| .:...|.|.                |:.:..||    ::...||.|.:         
Zfish    32 SLKKHRNRSIFSPFFCC----------------FRDYNAEPPATNNKTCSLPPPAEDNSSSPKCD 80

  Fly   203 ---------PP--YVQPPYTL--------VLEIKDVLVHP----------------DWTYETGWR 232
                     ||  |:.|..::        |:::.:.|||.                |.|....:.
Zfish    81 QVQVIPIPSPPAKYILPEVSINDYGKNCVVIDLDETLVHSSFKPISNADFIVPVEIDGTVHQVYV 145

  Fly   233 FK--------------------------KRPGVDVFLKECAKYFEIVVYTAEQGVTVFPLVDALD 271
            .|                          |||.||.||::..:.||.|::||.......|:.|.||
Zfish   146 LKRPHVDELLFVFLSVIVCLVCLKVYVLKRPHVDEFLQKMGEMFECVLFTASLAKYADPVADLLD 210

  Fly   272 PNGCIMYRLVRDSTHFDGGHHVKNLDNLNRDLKRVVVVDWDRNSTKFHPSNSFSIPRWSGNDNDT 336
            ..|....||.|:|..|..|::||:|..|.|:|.:|::||....|..|||.|:..:..|..:..||
Zfish   211 QWGVFRARLFRESCVFHRGNYVKDLSRLGRELNKVIIVDNSPASYIFHPENAVPVQSWFDDMTDT 275

  Fly   337 TLFELTSFLSVLGTSEIDDVREVLQ 361
            .|.:|.....  |.|...||..|||
Zfish   276 ELLDLLPLFE--GLSRETDVYSVLQ 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm2NP_612023.1 CPDc 208..336 CDD:214729 46/177 (26%)
PRK00771 <349..384 CDD:179118 7/13 (54%)
ctdsplaXP_068073219.1 HIF-SF_euk 106..292 CDD:274055 51/187 (27%)

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