DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm2 and Ctdp1

DIOPT Version :10

Sequence 1:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_080571.2 Gene:Ctdp1 / 67655 MGIID:1926953 Length:960 Species:Mus musculus


Alignment Length:416 Identity:85/416 - (20%)
Similarity:129/416 - (31%) Gaps:143/416 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 CRKLIVTSRSLTS---GLRRALVKQPRKGGDVGKPGMELGRCSCFGLRVNLSNAS--VVYVG--- 73
            |.:...|.|.|.|   |:.|.|..||   |.|..||         .|.|.|...|  ||..|   
Mouse    73 CVRAARTERRLRSERAGVVRELCAQP---GQVVAPG---------ALLVRLEGCSHPVVMKGLCA 125

  Fly    74 ------------HRRYSTYEKTSTQILTKLFPQTSEESNDEESRERRKLEEEEEQKELERAFRRM 126
                        :.|......|:|..:....|:....|...|     ||..|::|    |..|..
Mouse   126 ECGQDLTQLQSKNGRQQVPLSTATVSMVHSVPELMVSSEQAE-----KLGREDQQ----RLHRNR 181

  Fly   127 KLGFGLFGIGSMLFSFWAIYFYGRPSLDE---HGNEVIDEFSCLPQMQQLMWRTWKSVNRFQRFF 188
            ||...:                   .||:   |..|.    .| |||..      |.:..||...
Mouse   182 KLVLMV-------------------DLDQTLIHTTEQ----HC-PQMSN------KGIFHFQLGR 216

  Fly   189 KEPSRKKLLPDPLQPPYVQPPYTLVLEIKDVLVHPDWTYETGWRFKKRPGVDVFLKECAKYFEIV 253
            .||                            ::|.          :.||....||::.||.:|:.
Mouse   217 GEP----------------------------MLHT----------RLRPHCKDFLEKIAKLYELH 243

  Fly   254 VYTAEQGVTVFPLVDALDPNGCIM-YRLVRDSTHFDGGHHVKNLDNLNRDLKRVVVVDWDRNST- 316
            |:|....:....:...|||...:. :|::......|......||.||......:|.:..||... 
Mouse   244 VFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLFPCGDSMVCIIDDREDVW 308

  Fly   317 KFHPSNSFSIPRWSGNDNDTTLFELTSFLSVLGTSEID--------DVREVLQYYNQFSDSLSQF 373
            ||.|:                |..:..::...||.:::        ..|..:.:.::..|:|.|.
Mouse   309 KFAPN----------------LITVKKYVYFPGTGDVNAPPAARETQARRKVNHSSKGGDALEQA 357

  Fly   374 -----RENQRKLGELMHAEEVEKTSK 394
                 .|:.|....:.|:..:.|.|:
Mouse   358 LSVRDPEDGRPAPGVEHSNGLGKASR 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm2NP_612023.1 CPDc 208..336 CDD:214729 25/129 (19%)
PRK00771 <349..384 CDD:179118 8/47 (17%)
Ctdp1NP_080571.2 biotinyl_domain 27..111 CDD:133459 16/49 (33%)
FCP1_euk 177..323 CDD:131304 42/229 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 331..580 9/53 (17%)
BRCT_CTDP1 611..713 CDD:349361
FCP1_C 706..960 CDD:462751
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 770..834
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 854..948
Blue background indicates that the domain is not in the aligned region.

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