DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ttm2 and CTDSP1

DIOPT Version :10

Sequence 1:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster
Sequence 2:XP_011509871.1 Gene:CTDSP1 / 58190 HGNCID:21614 Length:394 Species:Homo sapiens


Alignment Length:408 Identity:106/408 - (25%)
Similarity:149/408 - (36%) Gaps:100/408 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LRRALVKQP---RKGGDVGKPGMELGRCSCFGLRVNLSNASVVYVGHRRYSTYE--KTSTQILTK 90
            ||||.:..|   |.......||:..||.        |...:.|..|   :...|  ..:||:.: 
Human     4 LRRAPMGHPLRLRPTPHPHPPGLRSGRV--------LGGGAEVTAG---WGGLEGSPANTQLRS- 56

  Fly    91 LFPQTSEESNDEESRERRKLEEEEEQKEL-ERAFRRMKLGF-----------------GLFGIGS 137
              ||||..:.......|.:.:....|:.| .|...|...|.                 |..|:|.
Human    57 --PQTSRHAWRRRPPRRHREDGRHFQESLGARGESRAPSGHAPPRKASPPRRGCVPQRGWAGVGG 119

  Fly   138 MLFSFWAIYFYGRPSLDEHGNEVIDEFS-CLPQMQQLMWRTWKSVNRFQRFFKEPSRKKL----- 196
            .:|||...   |...||........... ..|:::    ..||...:.....|..||..|     
Human   120 SVFSFSPC---GPQDLDAAPRSAHPRLGLAAPELR----ARWKGDQKSAASQKPRSRGILHSLFC 177

  Fly   197 ---------LPD--------------PLQPP--YVQP--------PYTLVLEIKDVLVHPDWTYE 228
                     ||.              |.|.|  |:.|        ...:|:::.:.|||..:...
Human   178 CVCRDDGEALPAHSGAPLLVEENGAIPKQTPVQYLLPEAKAQDSDKICVVIDLDETLVHSSFKPV 242

  Fly   229 TGWRF---------------KKRPGVDVFLKECAKYFEIVVYTAEQGVTVFPLVDALDPNGCIMY 278
            ....|               .|||.||.||:...:.||.|::||.......|:.|.||..|....
Human   243 NNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRA 307

  Fly   279 RLVRDSTHFDGGHHVKNLDNLNRDLKRVVVVDWDRNSTKFHPSNSFSIPRWSGNDNDTTLFELTS 343
            ||.|:|..|..|::||:|..|.|||:||:::|....|..|||.|:..:..|..|.:||.|.:|..
Human   308 RLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPVASWFDNMSDTELHDLLP 372

  Fly   344 FLSVLGTSEIDDVREVLQ 361
            |...|  |.:|||..||:
Human   373 FFEQL--SRVDDVYSVLR 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm2NP_612023.1 CPDc 208..336 CDD:214729 46/150 (31%)
PRK00771 <349..384 CDD:179118 6/13 (46%)
CTDSP1XP_011509871.1 HIF-SF_euk 223..382 CDD:274055 52/160 (33%)

Return to query results.
Submit another query.