DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm2 and Ctdsp2

DIOPT Version :9

Sequence 1:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001106941.1 Gene:Ctdsp2 / 52468 MGIID:1098748 Length:270 Species:Mus musculus


Alignment Length:207 Identity:63/207 - (30%)
Similarity:93/207 - (44%) Gaps:36/207 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 RFFKEPSRKKLLPDPLQPPYVQPPYTLVLEIKDVLVHPDW-----------------TYETGWRF 233
            :|::.|. ..|||:..:..  |....:|:::.:.|||..:                 |::.  ..
Mouse    80 QFYQIPG-TCLLPEVTEQD--QGRICVVIDLDETLVHSSFKPINNADFIVPVEIEGTTHQV--YV 139

  Fly   234 KKRPGVDVFLKECAKYFEIVVYTAEQGVTVFPLVDALDPNGCIMYRLVRDSTHFDGGHHVKNLDN 298
            .|||.||.||:...:.||.|::||.......|:.|.||..|....||.|::..|..|.:||:|..
Mouse   140 LKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFREACVFHQGCYVKDLSR 204

  Fly   299 LNRDLKRVVVVDWDRNSTKFHPSNSFSIPRWSGNDNDTTLFELTS-FLSVLGTSEIDDVREVLQY 362
            |.|||::.|::|....|..|||.|:..:..|..:..||.|..|.. |..:.||   |||      
Mouse   205 LGRDLRKTVILDNSPASYIFHPENAVPVQSWFDDMADTELLNLIPVFEELSGT---DDV------ 260

  Fly   363 YNQFSDSLSQFR 374
            |.    ||.|.|
Mouse   261 YT----SLGQLR 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm2NP_612023.1 CPDc 208..336 CDD:214729 42/144 (29%)
Ctdsp2NP_001106941.1 HIF-SF_euk 100..259 CDD:274055 49/163 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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