DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm2 and Ctdsp2

DIOPT Version :10

Sequence 1:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001106941.1 Gene:Ctdsp2 / 52468 MGIID:1098748 Length:270 Species:Mus musculus


Alignment Length:207 Identity:63/207 - (30%)
Similarity:93/207 - (44%) Gaps:36/207 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   186 RFFKEPSRKKLLPDPLQPPYVQPPYTLVLEIKDVLVHPDW-----------------TYETGWRF 233
            :|::.|. ..|||:..:..  |....:|:::.:.|||..:                 |::.  ..
Mouse    80 QFYQIPG-TCLLPEVTEQD--QGRICVVIDLDETLVHSSFKPINNADFIVPVEIEGTTHQV--YV 139

  Fly   234 KKRPGVDVFLKECAKYFEIVVYTAEQGVTVFPLVDALDPNGCIMYRLVRDSTHFDGGHHVKNLDN 298
            .|||.||.||:...:.||.|::||.......|:.|.||..|....||.|::..|..|.:||:|..
Mouse   140 LKRPYVDEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFREACVFHQGCYVKDLSR 204

  Fly   299 LNRDLKRVVVVDWDRNSTKFHPSNSFSIPRWSGNDNDTTLFELTS-FLSVLGTSEIDDVREVLQY 362
            |.|||::.|::|....|..|||.|:..:..|..:..||.|..|.. |..:.||   |||      
Mouse   205 LGRDLRKTVILDNSPASYIFHPENAVPVQSWFDDMADTELLNLIPVFEELSGT---DDV------ 260

  Fly   363 YNQFSDSLSQFR 374
            |.    ||.|.|
Mouse   261 YT----SLGQLR 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm2NP_612023.1 CPDc 208..336 CDD:214729 42/144 (29%)
PRK00771 <349..384 CDD:179118 10/26 (38%)
Ctdsp2NP_001106941.1 HIF-SF_euk 100..259 CDD:274055 49/163 (30%)

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