DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm2 and Ctdsp1

DIOPT Version :9

Sequence 1:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001121551.1 Gene:Ctdsp1 / 363249 RGDID:1305629 Length:261 Species:Rattus norvegicus


Alignment Length:165 Identity:57/165 - (34%)
Similarity:82/165 - (49%) Gaps:17/165 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   212 LVLEIKDVLVHPDWTYETGWRF---------------KKRPGVDVFLKECAKYFEIVVYTAEQGV 261
            :|:::.:.|||..:.......|               .|||.||.||:...:.||.|::||....
  Rat    93 VVIDLDETLVHSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQRMGELFECVLFTASLAK 157

  Fly   262 TVFPLVDALDPNGCIMYRLVRDSTHFDGGHHVKNLDNLNRDLKRVVVVDWDRNSTKFHPSNSFSI 326
            ...|:.|.||..|....||.|:|..|..|::||:|..|.|||:||:::|....|..|||.|:..:
  Rat   158 YADPVADLLDKWGAFRARLFRESCVFHRGNYVKDLSRLGRDLRRVLILDNSPASYVFHPDNAVPV 222

  Fly   327 PRWSGNDNDTTLFELTSFLSVLGTSEIDDVREVLQ 361
            ..|..|.:||.|.:|..|...|  |.:|||..||:
  Rat   223 ASWFDNMSDTELHDLLPFFEQL--SRVDDVYSVLR 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm2NP_612023.1 CPDc 208..336 CDD:214729 45/138 (33%)
Ctdsp1NP_001121551.1 HIF-SF_euk 90..249 CDD:274055 52/157 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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