DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm2 and ttm3

DIOPT Version :9

Sequence 1:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_610130.1 Gene:ttm3 / 35437 FlyBaseID:FBgn0032971 Length:343 Species:Drosophila melanogaster


Alignment Length:344 Identity:157/344 - (45%)
Similarity:214/344 - (62%) Gaps:33/344 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 NASVVYVGHRR---YSTYEKTSTQILTKLFPQTSEESNDEESRERRKLEEEEEQKELERAFRRMK 127
            |.|:.|:|.::   .|..||...                   ...||..:..::.......||:|
  Fly    11 NKSIGYIGKKKTCLLSPCEKICL-------------------NSARKTVQRCDKNYSPPKLRRIK 56

  Fly   128 LGFGLFGI--GSMLFS--FWAIYFYGRPSLDEHGNEVIDEFSCLPQMQQLMWRTWKSVNRFQRFF 188
             .|..:.:  || |||  .||||..|:|. ::|...:.||||.||..:|.:.|.|.::..:::..
  Fly    57 -NFYTYSVVLGS-LFSIVMWAIYKLGKPE-EDHRGPIEDEFSQLPWFRQYIMRMWHTLQYYEKMM 118

  Fly   189 KEPSRKKLLPDPLQPPYVQPPYTLVLEIKDVLVHPDWTYETGWRFKKRPGVDVFLKECAKYFEIV 253
            :||...:|||:.:.|||:||||:||||||||||||||||:||||||||||||.||::|::.||||
  Fly   119 EEPQMARLLPNVVPPPYIQPPYSLVLEIKDVLVHPDWTYQTGWRFKKRPGVDYFLQQCSRNFEIV 183

  Fly   254 VYTAEQGVTVFPLVDALDPNGCIMYRLVRDSTHFDGGHHVKNLDNLNRDLKRVVVVDWDRNSTKF 318
            :||:|||:|.|||:|||||.|.|.|||||.:|....|.|.||||.|||||.||:|||.|..:|..
  Fly   184 IYTSEQGMTAFPLLDALDPYGYIKYRLVRGATDLVEGQHTKNLDYLNRDLSRVIVVDCDPYTTPL 248

  Fly   319 HPSNSFSIPRWSGNDNDTTLFELTSFLSVLGTSEIDDVREVLQYYNQFSDSLSQFRENQRKLGEL 383
            ||.||..:.:|.|||:|..||:||:||.::...:::||||||:||.||.|.:.||::|||:|.| 
  Fly   249 HPDNSLVLTKWLGNDDDVQLFDLTAFLQLIAEHQVNDVREVLRYYRQFEDPMEQFKDNQRRLQE- 312

  Fly   384 MHAEEVEKTSKSRPVVKNW 402
            ...|.::....|.   :.|
  Fly   313 QSQESIQNLPTSE---RQW 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm2NP_612023.1 CPDc 208..336 CDD:214729 86/127 (68%)
ttm3NP_610130.1 CPDc 138..265 CDD:214729 86/126 (68%)
HIP1_clath_bdg 276..332 CDD:293123 21/57 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45459144
Domainoid 1 1.000 132 1.000 Domainoid score I1664
eggNOG 1 0.900 - - E1_COG5190
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 141 1.000 Inparanoid score I1782
Isobase 1 0.950 - 0.917438 Normalized mean entropy S1903
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1142452at2759
OrthoFinder 1 1.000 - - FOG0003614
OrthoInspector 1 1.000 - - otm26612
orthoMCL 1 0.900 - - OOG6_102279
Panther 1 1.100 - - P PTHR12210
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2489
1211.750

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