DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm2 and Dd

DIOPT Version :10

Sequence 1:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_608449.1 Gene:Dd / 33107 FlyBaseID:FBgn0029067 Length:243 Species:Drosophila melanogaster


Alignment Length:225 Identity:65/225 - (28%)
Similarity:99/225 - (44%) Gaps:43/225 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 LMWRTWKSV----NRFQRFF--KEPSRKKLLPDPLQP------PYVQPPYTLVLEIKDVLVH--- 222
            |:.:.|..:    ||..|.|  .:|.:.:|.  ||.|      ..||.. ||||::.:.|:|   
  Fly    15 LLSKVWTCICFMFNRQVRAFIQYQPVKYELF--PLSPVSRHRLSLVQRK-TLVLDLDETLIHSHH 76

  Fly   223 ---PDWTYETGW---------------RF--KKRPGVDVFLKECAKYFEIVVYTAEQGVTVFPLV 267
               |..|.:.|.               ||  .|||.||.||...::::::||:||...:....:.
  Fly    77 NAMPRNTVKPGTPHDFTVKVTIDRNPVRFFVHKRPHVDYFLDVVSQWYDLVVFTASMEIYGAAVA 141

  Fly   268 DALDPNG--CIMYRLVRDSTHFDGGHHVKNLDNLNRDLKRVVVVDWDRNSTKFHPSNSFSIPRWS 330
            |.|| ||  .:..|..|.....|.|.:.|:|..:..||.|:.::|....:.:..|:|:..|..|.
  Fly   142 DKLD-NGRNILRRRYYRQHCTPDYGSYTKDLSAICSDLNRIFIIDNSPGAYRCFPNNAIPIKSWF 205

  Fly   331 GNDNDTTLFELTSFLSVLGTSEIDDVREVL 360
            .:..||.|..|...|..|..:  :|||.||
  Fly   206 SDPMDTALLSLLPMLDALRFT--NDVRSVL 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm2NP_612023.1 CPDc 208..336 CDD:214729 41/152 (27%)
PRK00771 <349..384 CDD:179118 5/12 (42%)
DdNP_608449.1 HIF-SF_euk 60..228 CDD:274055 47/171 (27%)

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