DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm2 and ctdsp2

DIOPT Version :10

Sequence 1:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_955838.1 Gene:ctdsp2 / 321465 ZFINID:ZDB-GENE-030131-184 Length:258 Species:Danio rerio


Alignment Length:190 Identity:57/190 - (30%)
Similarity:83/190 - (43%) Gaps:20/190 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 FFKEPSRKKLLPDPLQPPYVQPPYTLVLEIKDVLVHPDWTYETGWRF---------------KKR 236
            |.|.|....|   |....:.|....:|:::.:.|||..:...:...|               .||
Zfish    69 FAKIPGESLL---PAVTSHDQGKICVVIDLDETLVHSSFKPISNADFIVPVEIEGTTHQVYVLKR 130

  Fly   237 PGVDVFLKECAKYFEIVVYTAEQGVTVFPLVDALDPNGCIMYRLVRDSTHFDGGHHVKNLDNLNR 301
            |.||.||:...:.||.|::||.......|:.|.||..|....||.|:|..|..|.:||:|..|.|
Zfish   131 PYVDEFLQRMGELFECVLFTASLAKYADPVTDLLDQCGVFRTRLFRESCVFYQGCYVKDLSRLGR 195

  Fly   302 DLKRVVVVDWDRNSTKFHPSNSFSIPRWSGNDNDTTLFELTSFLSVLGTSEIDDVREVLQ 361
            :|.:.:::|....|..|||.|:..:..|..:..||.|..|......|  |:.:||...||
Zfish   196 ELHKTLILDNSPASYIFHPENAVPVLSWFDDSEDTELLHLIPVFEEL--SQAEDVYSRLQ 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm2NP_612023.1 CPDc 208..336 CDD:214729 41/142 (29%)
PRK00771 <349..384 CDD:179118 5/13 (38%)
ctdsp2NP_955838.1 HIF-SF_euk 88..247 CDD:274055 47/160 (29%)

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