DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm2 and cnep-1

DIOPT Version :10

Sequence 1:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001254123.1 Gene:cnep-1 / 185802 WormBaseID:WBGene00018474 Length:276 Species:Caenorhabditis elegans


Alignment Length:309 Identity:75/309 - (24%)
Similarity:119/309 - (38%) Gaps:74/309 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 PQTSEESNDEESRERRKLEEEEEQKELERAFRRM-KLGFGLFGIGSMLFSFWAIYFYGRPSLDEH 156
            |.......:.||..||      :||:.....|.| .:...:|...:..|:|:.:|| .:.|....
 Worm     4 PNRQFGGGNPESHRRR------DQKQASLVLRTMTTIAQSVFCFLAGFFNFFLLYF-RKTSRAYC 61

  Fly   157 GNEVIDEFSCLPQMQQLMWRTWKSVNRFQRFFKEPSRKKLLPDPLQPPYVQPPYTLVLEIKDVLV 221
            ..:|:...|.:| |..|......:|.|           |:               |||::.:.|:
 Worm    62 KYQVVKYHSNIP-MSPLTTHRLLTVKR-----------KI---------------LVLDLDETLI 99

  Fly   222 H----------------PDWT-------YETGWRFKKRPGVDVFLKECAKYFEIVVYTAEQGVTV 263
            |                .|:|       :...:...:||.||.||...::::|:||:||...|..
 Worm   100 HSHHDGVLRQTVKPGTPSDFTIRVVIDRHPVKFSVHERPHVDYFLSVVSQWYELVVFTASMEVYG 164

  Fly   264 FPLVDALD-PNGCIMYRLVRDSTHFDGGHHVKNLDNLNRDLKRVVVVDWDRNSTKFHPSNSFSIP 327
            ..:.|.|| ..|.:..|..|.....:.|.:.|:|..::.||..:.::|....:.:..|.|:..||
 Worm   165 TSVADRLDRGRGILKRRYFRQHCTMEVGGYTKDLSAIHPDLSSICILDNSPGAYRKFPHNAIPIP 229

  Fly   328 RWSGNDNDTTLFELTSFLSVLGTSEIDDVREVL-------------QYY 363
            .|..:.|||.|..|..||..|..:  .|||.||             |||
 Worm   230 SWFSDPNDTCLLNLLPFLDALRFT--SDVRSVLSRNMQALPETQSVQYY 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm2NP_612023.1 CPDc 208..336 CDD:214729 37/151 (25%)
PRK00771 <349..384 CDD:179118 8/28 (29%)
cnep-1NP_001254123.1 HIF-SF_euk 87..255 CDD:274055 46/195 (24%)

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