DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm2 and CTDSP2

DIOPT Version :9

Sequence 1:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster
Sequence 2:XP_005268613.1 Gene:CTDSP2 / 10106 HGNCID:17077 Length:277 Species:Homo sapiens


Alignment Length:196 Identity:59/196 - (30%)
Similarity:86/196 - (43%) Gaps:33/196 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 LLPDPLQPPYVQPPYTLVLEIKDVLVHPDW-----------------TYETGWRFKKRPGVDVFL 243
            |||:..:..  |....:|:::.:.|||..:                 |::.  ...|||.||.||
Human    96 LLPEVTEED--QGRICVVIDLDETLVHSSFKPINNADFIVPIEIEGTTHQV--YVLKRPYVDEFL 156

  Fly   244 KECAKYFEIVVYTAEQGVTVFPLVDALDPNGCIMYRLVRDSTHFDGGHHVKNLDNLNRDLKRVVV 308
            :...:.||.|::||.......|:.|.||..|....||.|:|..|..|.:||:|..|.|||::.::
Human   157 RRMGELFECVLFTASLAKYADPVTDLLDRCGVFRARLFRESCVFHQGCYVKDLSRLGRDLRKTLI 221

  Fly   309 VDWDRNSTKFHPSNSFSIPRWSGNDNDTTLFELTSFLSVLGTSEIDDVREVLQYYNQFSDSLSQF 373
            :|....|..|||.|:..:..|..:..||.|..|......|..:|  ||      |.    ||.|.
Human   222 LDNSPASYIFHPENAVPVQSWFDDMADTELLNLIPIFEELSGAE--DV------YT----SLGQL 274

  Fly   374 R 374
            |
Human   275 R 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm2NP_612023.1 CPDc 208..336 CDD:214729 42/144 (29%)
CTDSP2XP_005268613.1 HIF-SF_euk 107..266 CDD:274055 48/162 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5190
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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