DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm2 and ctdspl

DIOPT Version :9

Sequence 1:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster
Sequence 2:XP_031759361.1 Gene:ctdspl / 100487887 XenbaseID:XB-GENE-1013061 Length:276 Species:Xenopus tropicalis


Alignment Length:303 Identity:78/303 - (25%)
Similarity:127/303 - (41%) Gaps:61/303 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 STQILTKLFPQTSEESNDEESRERRKLEEEEEQKELERAFRRMKLGFGLFGIGSMLFSFWAIYFY 148
            :|.|:|::       ||.:|.......:|:..|..:....:|.:      .|.|.||..:..|..
 Frog     3 NTSIITQV-------SNPKEEGILSCAQEKVSQCNISLKKQRNR------SIFSSLFCCFRSYSV 54

  Fly   149 GRPSLDEHGN---EVIDEFSCLPQMQQLMWRTWKSVNRFQRFFKEPSRKKLLPDPLQPPYVQPPY 210
            ..|:.:.:.:   .:::|...:.:..|....|..|          |..|.|||:.....|.:.  
 Frog    55 EPPTSNNNSSPLPPLVEENGGIQKADQTQALTIPS----------PPAKYLLPELKVSDYGKK-- 107

  Fly   211 TLVLEIKDVLVHPDWTYETGWRFK-----------------------KRPGVDVFLKECAKYFEI 252
            .:|:::.:.|||..        ||                       |||.||.||::..:.||.
 Frog   108 CVVIDLDETLVHSS--------FKPINNADFIVPVEIDGTIHQVYVLKRPHVDEFLQKMGELFEC 164

  Fly   253 VVYTAEQGVTVFPLVDALDPNGCIMYRLVRDSTHFDGGHHVKNLDNLNRDLKRVVVVDWDRNSTK 317
            |::||.......|:.|.||..|....||.|:|..|..|::||:|..|.|:|.:|:::|....|..
 Frog   165 VLFTASLAKYADPVADLLDRWGVFNARLFRESCVFHRGNYVKDLSRLGRELSKVIIIDNSPASYI 229

  Fly   318 FHPSNSFSIPRWSGNDNDTTLFELTSFLSVLGTSEIDDVREVL 360
            |||.|:..:..|..:..||.|.:|..|..  |.|:.|:|..:|
 Frog   230 FHPENAVPVQSWFDDMTDTELLDLIPFFE--GLSKEDNVYNML 270

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm2NP_612023.1 CPDc 208..336 CDD:214729 43/150 (29%)
ctdsplXP_031759361.1 HIF-SF_euk 106..264 CDD:274055 50/169 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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