DRSC/TRiP Functional Genomics Resources

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Protein Alignment ttm2 and timm50

DIOPT Version :9

Sequence 1:NP_612023.1 Gene:ttm2 / 38049 FlyBaseID:FBgn0035124 Length:409 Species:Drosophila melanogaster
Sequence 2:NP_001120038.1 Gene:timm50 / 100145004 XenbaseID:XB-GENE-963112 Length:368 Species:Xenopus tropicalis


Alignment Length:343 Identity:132/343 - (38%)
Similarity:197/343 - (57%) Gaps:21/343 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 VGHR---RYSTYEK--------TSTQILTKLFPQTSEESNDEESRERRKLEEEEEQKELERAFRR 125
            :|.|   ||..:..        |...:..||..:.:|.|:|....|.::.:::|.....:|...|
 Frog    19 LGQRTELRYRAFSSEQGAEGGLTGAVLQEKLQRRENEASSDSSGSEEKQKKQKENAANAKRFLLR 83

  Fly   126 MKLGFGLFGIGSMLFSFWAIYFYGRPSLDEHGNEVIDEFSCLPQMQQLMWRTWKSVNRFQRFFKE 190
            .....|:.|.||:      :|.:|..|:||.||::.|||...|.:.|.:.||:|....:::...|
 Frog    84 AAGLLGVAGSGSL------VYIFGSNSVDEQGNKIPDEFDSDPPVVQQIRRTYKYFIDYRQMIIE 142

  Fly   191 PSRKKLLPDPLQPPYVQPPYTLVLEIKDVLVHPDWTYETGWRFKKRPGVDVFLKECAKYFEIVVY 255
            |:..|||||||:.||.|||||||||:.|||:||:|:..||||||||.|:|...::.|..:|||::
 Frog   143 PTSPKLLPDPLKEPYYQPPYTLVLELTDVLLHPEWSLSTGWRFKKRAGIDNLFQQLAPLYEIVIF 207

  Fly   256 TAEQGVTVFPLVDALDPNGCIMYRLVRDSTHFDGGHHVKNLDNLNRDLKRVVVVDWDRNSTKFHP 320
            |:|.|:|.|||:|.:||:|.:.|||.||:|.:..|||||::..||||...||:||..|.:.|..|
 Frog   208 TSETGLTAFPLIDNVDPHGFVSYRLFRDATRYTDGHHVKDISCLNRDPSHVVIVDCKREAFKLQP 272

  Fly   321 SNSFSIPRWSGNDNDTTLFELTSFLSVLGTSEIDDVREVLQYYNQFSDSLSQFRENQRKLGELMH 385
            .|..:|.:|.|:..|..|::||:||..:..|.:.|||.||:.|....|.|..|:..|.:|.:   
 Frog   273 YNGLAIKKWDGSSEDRALYDLTAFLKTIAVSGVSDVRSVLENYALEEDPLEAFKRRQTQLEQ--- 334

  Fly   386 AEEVEKTSKSRPVVKNWT 403
             ||.::.:....:.|..|
 Frog   335 -EEQQRLADMSQLSKRQT 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ttm2NP_612023.1 CPDc 208..336 CDD:214729 65/127 (51%)
timm50NP_001120038.1 LPLAT <64..>128 CDD:388412 20/69 (29%)
HAD_FCP1-like 161..278 CDD:319823 61/116 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 173 1.000 Domainoid score I3648
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 260 1.000 Inparanoid score I3026
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1142452at2759
OrthoFinder 1 1.000 - - FOG0003614
OrthoInspector 1 1.000 - - otm48079
Panther 1 1.100 - - O PTHR12210
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1522
SonicParanoid 1 1.000 - - X2489
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.190

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