DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL17 and rplQ

DIOPT Version :10

Sequence 1:NP_523870.2 Gene:mRpL17 / 38046 FlyBaseID:FBgn0035122 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_417753.1 Gene:rplQ / 947784 ECOCYCID:EG10878 Length:127 Species:Escherichia coli


Alignment Length:119 Identity:36/119 - (30%)
Similarity:48/119 - (40%) Gaps:25/119 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 RHLKNVDGPEGRLLK---------LRKTVTALVKHERIELFYNRADEARGYAELLISNAIRHGDR 77
            ||.|:     ||.|.         .|....:||:||.|:....:|.|.|...|.||:.|....  
E. coli     2 RHRKS-----GRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDS-- 59

  Fly    78 HQATMELADYWLLEKQLVHKLFKVLVPRYETYNVSYTRMYK--------APREY 123
             .|...||.....:.::|.|||..|.||:.:....|||:.|        ||..|
E. coli    60 -VANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAY 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL17NP_523870.2 Ribosomal_L17 37..121 CDD:460106 28/91 (31%)
rplQNP_417753.1 RplQ 1..121 CDD:439973 36/119 (30%)

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