DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL17 and AT5G09770

DIOPT Version :10

Sequence 1:NP_523870.2 Gene:mRpL17 / 38046 FlyBaseID:FBgn0035122 Length:176 Species:Drosophila melanogaster
Sequence 2:NP_568216.1 Gene:AT5G09770 / 830837 AraportID:AT5G09770 Length:160 Species:Arabidopsis thaliana


Alignment Length:132 Identity:42/132 - (31%)
Similarity:54/132 - (40%) Gaps:32/132 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PEG-RLLKLRKTVTALVKHERIELFYNRADEARGYAELLISNAIRHGD-------RHQATMELAD 86
            |.| |:..||..|:.||||||||....:|.|.|..|:    |.|:.|.       |..|.....|
plant    10 PAGHRMSMLRTMVSQLVKHERIETTVTKAKEVRRLAD----NMIQLGKEGSLSAARRAAGFVRGD 70

  Fly    87 YWLLEKQLVHKLFKVLVPRYETYNVSYTRMYK--------APREYPGIYYRRSVLELR----GNP 139
                  .::||:|..|..||:.....|||:.:        ||..|.....|.:  |||    ..|
plant    71 ------DVLHKIFTELAHRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFIDREN--ELRQSKPATP 127

  Fly   140 YP 141
            .|
plant   128 QP 129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL17NP_523870.2 Ribosomal_L17 37..121 CDD:460106 31/98 (32%)
AT5G09770NP_568216.1 RplQ 2..118 CDD:439973 37/119 (31%)

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