DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tudor-SN and Tudor2

DIOPT Version :9

Sequence 1:NP_001261195.1 Gene:Tudor-SN / 38045 FlyBaseID:FBgn0035121 Length:926 Species:Drosophila melanogaster
Sequence 2:NP_200986.1 Gene:Tudor2 / 836300 AraportID:AT5G61780 Length:985 Species:Arabidopsis thaliana


Alignment Length:1033 Identity:342/1033 - (33%)
Similarity:521/1033 - (50%) Gaps:182/1033 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 AAGAAKDAPPAPTKSLSGIVKQVLSGDTVVIRA---TKGAPPPEKQITFSHVLAPKLARRPGAGG 71
            |.|||.:     .:.|.|.||.|.|||.:||.|   .:..|||||.||.|.::|||:|||.|.  
plant     2 ATGAATE-----NQWLKGRVKAVTSGDCLVITALTHNRAGPPPEKTITLSSLMAPKMARRGGI-- 59

  Fly    72 DETKDEPWAWESREFLRKKLIGVEVTFTFD--KPANSNREYGFVWIGKDKETGENVVESIVREGL 134
                |||:||||||||||..||.||.|..|  ..|.:.||:|.|::|     .||:.:.:|:.|.
plant    60 ----DEPFAWESREFLRKLCIGKEVAFKVDYKVEAIAGREFGSVYLG-----NENLAKLVVQNGW 115

  Fly   135 VSVRREGRPTAEQQT-----LIELEDQARAAGRGKWSPTASAAD-KVRNIKWSHENPAHLVDIYG 193
            ..|||.|:...::.:     |.:||:||:..|.|:||....||: .:||:..|....:...|..|
plant   116 AKVRRPGQQNQDKVSPYIAELEQLEEQAQQEGFGRWSKVPGAAEASIRNLPPSAVGDSGNFDAMG 180

  Fly   194 ------GNPVKAIIEHVRDGSTVRAFLLPDFHYITLMISGIRCPGV-----KLDADGKPDL---- 243
                  |.|::.|:|.||||||:|.:|||:|.::.:.::|::.|.:     ..:|...||:    
plant   181 LLAASKGKPMEGIVEQVRDGSTIRVYLLPEFQFVQVFVAGLQAPSMGRRQSTQEAVVDPDVTATS 245

  Fly   244 ------------------------SVKV---PFADEARYYVETRLLQRDVEIRLESVNN-SNFIG 280
                                    ||:|   |||.||:|:.|.|:|.|||.|.||.|:. :|.||
plant   246 NGDASAETRGPLTTAQRLAASAASSVEVSSDPFAMEAKYFTELRVLNRDVRIVLEGVDKFNNLIG 310

  Fly   281 TILYPKGNIAE----SLLREGLAKCVDWSMAVM-KTGTDKLRAAERFAKEKRLRQWQDYQAKTPA 340
            ::.|..|:..:    .|:..||||.|:||..:: :....||:|.|...|:.|::.|.:|  ..||
plant   311 SVYYSDGDTVKDLGLELVENGLAKYVEWSANMLDEEAKKKLKATELQCKKNRVKMWANY--VPPA 373

  Fly   341 FNSK---EKDFSGTVVEVFNGDAINVRLSNGQVKKVFFSSIRPPRDQRAVVGTDGEEIVKAPPRG 402
            .|||   :::|:|.||||.:||.:.|...:     :.|.|  |..::|..:.:     :::|..|
plant   374 SNSKAIHDQNFTGKVVEVVSGDCLVVADDS-----IPFGS--PMAERRVCLSS-----IRSPKMG 426

  Fly   403 KNYRPLYEIPHMFDAREFLRKKLINKKVQCNLDY---ISP---------------------PREN 443
            ...|.....|:..:|:||||:|||..:|...::|   |||                     |...
plant   427 NPRREEKPAPYAREAKEFLRQKLIGMEVIVQMEYSRKISPGDGVTTSGAGDRVMDFGSVFLPSPT 491

  Fly   444 FPEKYCYTVSIGGQNVAEAMVAKGLATCVRYRQDDDQRSSAYDQLIAAEQQAIKGLKGLHAKKDN 508
            ..:......:..|.|:||.::::||.|.||:| |.::||:.||.|:|||.:||.|.|.:|:.||:
plant   492 KGDTAVAAAATPGANIAELIISRGLGTVVRHR-DFEERSNHYDALLAAEARAIAGKKNIHSAKDS 555

  Fly   509 ATLRVNDLTVDHSRIKVQYLPSWQRALRTEAIVEFVASGSRLRIFVPKDSCLVTFLLAGISCPRS 573
            ..|.:.||||..::....:|||.||..:..|:||:|.||.|.::::||:||.:.|..:|:.||  
plant   556 PALHIADLTVASAKKAKDFLPSLQRINQISAVVEYVLSGHRFKLYIPKESCSIAFAFSGVRCP-- 618

  Fly   574 SRPALNGVPAQEGEPFGDEALTFTRERVLQRDVSVHIDTTDKAGSSVIGWLW-TDSGANLSVALV 637
                      ..|||:.:||:...|.:::||||.:.::..|:.| :.:|.:| .:|..|....|:
plant   619 ----------GRGEPYSEEAIALMRRKIMQRDVEIVVENVDRTG-TFLGSMWEKNSKTNAGTYLL 672

  Fly   638 EEGLAEVH--FSAEKSEYYRQLKIAEDRAKAAKKNIWTNYVEEVPKEKTVTEEEKEDKVVAERKV 700
            |.|||::.  |.|::......|::||..||..|..||.||||   .|:.|....|    |..|:.
plant   673 EAGLAKMQTGFGADRIPEAHILEMAERSAKNQKLKIWENYVE---GEEVVNGSSK----VETRQK 730

  Fly   701 NYENVIVTEITETLTFFAQSVESGSKLESLMSKLHADFQSNPPIAGSYTPKRGDLVAAQFTLDNQ 765
            ....|:|||:.....|:.|:| ...|:.|:.::|.|....:.||.||:.||:||:|.|||:|||.
plant   731 ETLKVVVTEVLGGGRFYVQTV-GDQKVASIQNQLAALSLKDAPIIGSFNPKKGDIVLAQFSLDNS 794

  Fly   766 WYRAKVERVQGSNAT---------VLYIDYGNKETLPTNRLAALPPAFSSEKPYATEYALALVAL 821
            |.||.:  |.|....         |.||||||:|.:|.:.:..:.|:.||....|....||.:.:
plant   795 WNRAMI--VNGPRGAVQSPEEEFEVFYIDYGNQEIVPYSAIRPVDPSVSSAPGLAQLCRLAYIKV 857

  Fly   822 PTDNEDKEEALRAFSEDV--LNHKVQL------------------NVELKVTGSPNLATLRDPTT 866
            |...||       |..|.  ..|.|.|                  .|:.:.||:..:.||.....
plant   858 PGKEED-------FGRDAGEYLHTVTLESGKEFRAVVEERDTSGGKVKGQGTGTELVVTLIAVDD 915

  Fly   867 KVDFGKQLVAEGLVLAEQRGERKLKE---LVDQYKAAQEAARVAHLAIWKYGDITQDD 921
            ::.....::.||:...|:|...:.|:   .:|..:..|:.||.:...||:||||..||
plant   916 EISVNAAMLQEGIARMEKRRRWEPKDKQAALDALEKFQDEARKSRTGIWEYGDIQSDD 973

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tudor-SNNP_001261195.1 SNc 23..166 CDD:214615 66/152 (43%)
SNc 195..333 CDD:214615 58/179 (32%)
SNc 346..504 CDD:320778 54/181 (30%)
SNc 538..672 CDD:214615 44/136 (32%)
TUDOR 697..817 CDD:306940 45/128 (35%)
SNc 767..914 CDD:320778 43/178 (24%)
Tudor2NP_200986.1 SNc 39..>120 CDD:294094 43/91 (47%)
SNc 188..368 CDD:214615 58/179 (32%)
SNc 197..368 CDD:294094 55/170 (32%)
SNc 382..551 CDD:214615 54/181 (30%)
SNc 391..551 CDD:294094 49/172 (28%)
SNc 582..709 CDD:214615 44/139 (32%)
SNc 590..709 CDD:294094 41/131 (31%)
TUDOR 730..853 CDD:278965 44/125 (35%)
TUDOR 782..835 CDD:119391 23/54 (43%)
SNc 856..966 CDD:294094 24/116 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 84 1.000 Domainoid score I2850
eggNOG 1 0.900 - - E1_COG1525
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H8665
Inparanoid 1 1.050 457 1.000 Inparanoid score I374
OMA 1 1.010 - - QHG53811
OrthoDB 1 1.010 - - D227839at2759
OrthoFinder 1 1.000 - - FOG0004476
OrthoInspector 1 1.000 - - otm2475
orthoMCL 1 0.900 - - OOG6_102097
Panther 1 1.100 - - LDO PTHR12302
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3762
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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